| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_4077 |
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| Symbol | |
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| ID | 5372777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 4859920 |
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| End bp | 4860594 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640832341 |
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| Product | ribulose-phosphate 3-epimerase |
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| Protein accession | YP_001368258 |
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| Protein GI | 153002577 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
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| TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGTCCAT TCTTGATTGC TCCATCGATT TTATCTGCCG ATTTTGCCCG TTTGGGCGAT
GATGTAAAAG CCGTGTTAGA TGCGGGGACC GACGTAGTGC ATTTTGATGT GATGGATAAT
CACTATGTTC CTAACTTAAC GATTGGCCCT ATGGTGTGCC AAGCGCTGCG TAACTACGGT
ATTACCGCCG ATATTGATGT GCATTTGATG GTCAAGCCAG TTGACCGCAT CGTGCCTGAT
TTTGCTAAGG CGGGCGCATC TATTATTACT TTCCATCCAG AAGCTTCAGA ACACGTCGAT
CGCACACTTC AGTTGATCAA AGAGTGTGGC TGTAAAGCGG GTCTCGTGTT TAACCCTGCT
ACACCACTGC ATTATCTCGA CCATGTGATG GATAAGCTGG ATGTGATTCT ATTGATGTCG
GTGAACCCTG GCTTTGGCGG TCAATCCTTT ATCCCATCGA CCTTAGATAA GCTGCGTCAA
GTGCGTGCGC GTATCGATGC CAGTGGTTTT GATATTCGCT TAGAAGTGGA TGGCGGCGTT
AAGGTCGACA ATATTGCTGA AATCGCCGCC GCCGGTGCCG ACATGTTTGT TGCGGGCTCT
GCCATTTTCG GCAAGCCAGA TTACAAAGCT GTTGTTGATG AGATGCGTGC CGAACTTGCT
AAAGTTGGGG CATAG
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| Protein sequence | MRPFLIAPSI LSADFARLGD DVKAVLDAGT DVVHFDVMDN HYVPNLTIGP MVCQALRNYG
ITADIDVHLM VKPVDRIVPD FAKAGASIIT FHPEASEHVD RTLQLIKECG CKAGLVFNPA
TPLHYLDHVM DKLDVILLMS VNPGFGGQSF IPSTLDKLRQ VRARIDASGF DIRLEVDGGV
KVDNIAEIAA AGADMFVAGS AIFGKPDYKA VVDEMRAELA KVGA
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