| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_4075 |
|---|
| Symbol | |
|---|
| ID | 5370406 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 4858170 |
|---|
| End bp | 4859168 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640832339 |
|---|
| Product | tryptophanyl-tRNA synthetase |
|---|
| Protein accession | YP_001368256 |
|---|
| Protein GI | 153002575 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0180] Tryptophanyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00233] tryptophanyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAAC CCATAGTACT CAGCGGTGCA CAGCCGTCCG GCGAATTAAC CATAGGTAAC
TACATGGGTG CATTGCGTCA ATGGGTTGCG ATGCAAGATA GCCACGACTG CCTCTATTGT
GTGGTCGACT TGCATGCCAT TACCGTGCGT CAAGATCCTA AAGCGTTGCG CGAAGCCTGT
TTAGACACCT TAGCCCTGTA TTTGGCCTGT GGCGTCGATC CTAAAAAGAG CACAGTGTTT
ATCCAGTCAC AGGTGCCACA ACATACGCAA TTGGGTTGGG CATTAAACTG CTACACCCAA
ATGGGCGAGT TGAGCCGCAT GACGCAGTTT AAAGATAAGT CACAAAAGCA TGCTAACAAC
ATCAACGTGG GTCTGTTTGG TTACCCAGTG CTGATGGCGG CGGATATTCT GATTTATCAA
GCGAACGAAA TCCCAGTTGG TCAAGATCAG AAGCAACACC TTGAGTTAAC GCGTGATATC
GCGACTCGCT TCAACAATGC CTACGGCGAT ACTTTCACCA TTCCTGAGCC GTTTATTCCT
GAACATGGCG CGAAAGTGAT GTCGTTGCAG GAGCCGCTGA AGAAGATGTC TAAGTCAGAC
GAGAACCGTA ACAACGTCAT CGGCCTGCTA GAAGATCCAA AAGCCGTGCT GAAGAAGCTG
AAAAAAGCTA TGACAGACAG TGATGAGCCG CCAGTCGTGC GTTTCGATAT GGAGAATAAG
CCAGGCGTTT CTAACCTGCT GAGTCTCATG TCGGGTGTGA CGGGGCAAAG TATTGCAAGC
CTAGAAGCCG AGTTTGAAGG CAAGATGTAT GGCCATTTGA AAGGTGCAGC AGGCGAAGCG
GTTGTGAGCA TGTTAGAGCC GCTGCAAGAG CGTTACCGCG CGATTCGTGC CGACCGTGCT
TACTTAGACC AAGTGATGAA AGCTGGCGCT GAAAGTGCGC AGGCGCGCGC CGAAGTGACA
TTGAAGAAAG TGTACGAGAA GATTGGTTTG TTAGTGTAA
|
|---|
| Protein sequence | MTKPIVLSGA QPSGELTIGN YMGALRQWVA MQDSHDCLYC VVDLHAITVR QDPKALREAC
LDTLALYLAC GVDPKKSTVF IQSQVPQHTQ LGWALNCYTQ MGELSRMTQF KDKSQKHANN
INVGLFGYPV LMAADILIYQ ANEIPVGQDQ KQHLELTRDI ATRFNNAYGD TFTIPEPFIP
EHGAKVMSLQ EPLKKMSKSD ENRNNVIGLL EDPKAVLKKL KKAMTDSDEP PVVRFDMENK
PGVSNLLSLM SGVTGQSIAS LEAEFEGKMY GHLKGAAGEA VVSMLEPLQE RYRAIRADRA
YLDQVMKAGA ESAQARAEVT LKKVYEKIGL LV
|
|---|
| |