Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3963 |
Symbol | prmA |
ID | 5370584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 4712286 |
End bp | 4713167 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640832225 |
Product | ribosomal protein L11 methyltransferase |
Protein accession | YP_001368147 |
Protein GI | 153002466 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2264] Ribosomal protein L11 methylase |
TIGRFAM ID | [TIGR00406] ribosomal protein L11 methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00574631 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTTGGA TCCAACTCCG TATAAACACC AATAGCGATG ACGCTGAAAC CATCAGCGAC TTGCTCATGG AAGAAGGCTC AGTCTCTATC ACCTTCGAAG ACGGTAAAGA CACCCCTATT TTTGAACCTA AACTGGGCGA AACCCCACTG TGGCGCGATA CAGTTGTCGT TGCCCTATTC GATGCAGAAA CCGATCTGAC ACCGACCATC GCCATGCTGA AAACCTTGCC TTTCCTCGGC GAGAACTTCA GCCATAAGGT CGAACAAATT GAAGATAAAG ACTGGGTGCG TGAGTGGATG GATAACTTCC ACCCCATTCA ATTCGGCACA CGTCTGTGGA TTTGCCCAAG CTGGCGCGAG ATCCCCGATC CAACCGCAGT CAATGTGATC CTCGATCCAG GTCTTGCCTT CGGCACAGGC ACTCACCCTA CGACAGCGCT GTGTTTAGAG TGGCTAGACA GCTTAGATTT AAGCAATAAA GAAGTGATCG ACTTTGGCTG TGGCTCTGGC ATCTTAGCCG TAGCCGCACT GAAACTGGGC GCGAAAAACG TCACAGGTAT CGATATCGAC TATCAAGCCA TCGACGCCTC ACGTGCCAAC GCCGAGCGCA ATGATGTCGC CGACAAGCTA GCCTTGTACT TACCAGAAGA CCAACCCGCC GATCTCAAAG CCGACGTACT GGTCGCCAAT ATTCTTGCCG GCCCACTGCG TGAACTAGCG CCTTTGATCG CAGAACGCGT AAAAACCGGC GGCAAACTTG CCCTTTCCGG TCTCCTCAAA GAACAAGCCC AAGAAATCTC TGACTTTTAT AGCCAATGGT TCGATATGGA CGTAGCGGCT CACAAAGAAG ATTGGAGCCG CTTGACAGGC AAGCGTAAAT AG
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Protein sequence | MPWIQLRINT NSDDAETISD LLMEEGSVSI TFEDGKDTPI FEPKLGETPL WRDTVVVALF DAETDLTPTI AMLKTLPFLG ENFSHKVEQI EDKDWVREWM DNFHPIQFGT RLWICPSWRE IPDPTAVNVI LDPGLAFGTG THPTTALCLE WLDSLDLSNK EVIDFGCGSG ILAVAALKLG AKNVTGIDID YQAIDASRAN AERNDVADKL ALYLPEDQPA DLKADVLVAN ILAGPLRELA PLIAERVKTG GKLALSGLLK EQAQEISDFY SQWFDMDVAA HKEDWSRLTG KRK
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