| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3944 |
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| Symbol | |
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| ID | 5369712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 4691744 |
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| End bp | 4692670 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640832206 |
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| Product | prepilin peptidase |
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| Protein accession | YP_001368128 |
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| Protein GI | 153002447 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGAAT TCATCTCCAT TTTGGGCCAG TCTCTAAACC AGAGTCCTTG GCTCTTTATT
GCTTTAAGCT TTATTTTTGC CGCTACCATT GGTAGTTTTT TAAACGTGGT GATCCACAGA
TTTCCTGTGA TGATGAAACG AGAATGGCAA CAAGAATGCA ATCAGTATTT GCAGGAATAC
CACGAAGACA TAGTCAAAAA AATCGGTATA GAACAACTCA ATAAACCTAT AGATGCCTTC
CCTGAAAAGT ACAATCTTGT TGTGCCTGGT TCAGCCTGCC CTAAATGTAA AACGGCGATT
AAACCTTGGC ATAATTTACC CCTATTAGGC TGGTTAATGC TCAAGGGGAA ATGCGCCGCC
TGTAACGCCC CTATTTCTGC TCGTTACCCT ATTATTGAAT TCATCACAGG GCTACTTATC
GCGACTTTAG CTTGGCATTT TGGTCCAAGC TGGCAGTTTG TTTTTGCTAG CATACTCACC
TTTGTGCTTG TAGCACTGAC AGGTATCGAT CTTGATGAGA TGTTGCTCCC CGACCAAATG
ACGCTACCGT TGCTTTGGCT CGGCTTGATA ATCAATCTAA ATCATACCTT TGCGAGCCCA
ACCGATGCCA TTATCGGCGC GGCGGCAGGC TATTTGAGTC TATGGTCCAT TTTCTGGTTG
TTTAAAATCC TCACAGGTAA AGAAGGCATG GGTTATGGCG ACTTTAAATT ACTCGCCGTG
TTCGGTGCTT GGCTTGGCTG GCAAATGCTG CCGCTGGTGA TTTTACTTTC GTCCCTCGTT
GGCGCAGTCG TTGGCATCAC TATGATTGTC AGTAAACGCC TCAAACAAGG TAATCCAATC
CCATTTGGCC CATATATTGC CGCAGCTGGC TGGATAGCTT TGCTATTTGG GCAACAGATT
GTCGATTGGT ACCTATCGAC ACTGTAA
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| Protein sequence | MSEFISILGQ SLNQSPWLFI ALSFIFAATI GSFLNVVIHR FPVMMKREWQ QECNQYLQEY
HEDIVKKIGI EQLNKPIDAF PEKYNLVVPG SACPKCKTAI KPWHNLPLLG WLMLKGKCAA
CNAPISARYP IIEFITGLLI ATLAWHFGPS WQFVFASILT FVLVALTGID LDEMLLPDQM
TLPLLWLGLI INLNHTFASP TDAIIGAAAG YLSLWSIFWL FKILTGKEGM GYGDFKLLAV
FGAWLGWQML PLVILLSSLV GAVVGITMIV SKRLKQGNPI PFGPYIAAAG WIALLFGQQI
VDWYLSTL
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