| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3934 |
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| Symbol | aceE |
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| ID | 5369951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 4678874 |
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| End bp | 4681540 |
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| Gene Length | 2667 bp |
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| Protein Length | 888 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640832197 |
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| Product | pyruvate dehydrogenase subunit E1 |
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| Protein accession | YP_001368119 |
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| Protein GI | 153002438 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2609] Pyruvate dehydrogenase complex, dehydrogenase (E1) component |
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| TIGRFAM ID | [TIGR00759] pyruvate dehydrogenase E1 component, homodimeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.441572 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGAAG ATATGCTACA AGACGTAGAT CCATTAGAGA CTCAGGAATG GGTTGATGCC
CTGCAAGCCG TGTTGGAACA GGAAGGCCCA GAGCGCGCGC ATTTTTTACT AGAGAAGCTG
ATCGATAAAG CGCGTCGTAA TGGCACTCAC TTGCCTTACA ATGCCACAAC GGCTTACTTG
AACACTATCC CAGCGGGTCA AGAGCCTCAC ATGCCTGGCA ACCAAGAGAT GGAACGTCGC
ATTCGCGCCA TCATCCGTTG GAACGCTTTG GCTATGGTTC TGCGTGGTTC TAAGAAAGAT
TTAGAGTTGG GCGGCCATAT CTCAAGTTTC GCTTCAAGCG CGACTATCTA TGACGTATGT
TTTAACCACT TCTTCCGTGC ACCGAATGAG AAAGACGGTG GCGATCTCGT GTATTTCCAA
GGCCATATCG CCCCTGGTAT TTATGCGCGT TCATTCCTAG AAGGTCGTTT AAGCGAAGAG
CAACTGGCTA ACTTCCGTCA AGAAGTGGAT GGCAAGGGTC TGTCTTCATA CCCACATCCA
AAACTGATGC CGGATTACTG GCAATTCCCA ACGGTTTCTA TGGGCTTAGG TCCAATCCAA
GCCATCTATC AAGCCCGTTT CCTGAAATAT CTGACTGACC GCGGTCTGAA AGATTGTTCA
GCACAAACTG TTTACTGTTT CTTAGGTGAC GGTGAGTGTG ACGAGCCAGA AGCCTTAGGT
GCGATCGGTT TAGCAGCCCG TGAAGAATTA GATAACTTAG TCTTCATCGT TAACTGTAAC
TTACAGCGTC TTGATGGCCC TGTACGTGGT AACGGTAAGA TCATCCAAGA ACTTGAAGGC
GAATTCCGCG GCGCAGGCTG GGAAGTGGTG AAAGTGATTT GGGGTCGTTA CTGGGATCCA
TTATTGGCCC GTGACACCAG CGGTAAACTA CTGCAGTTAA TGGAAGAAAC CGTTGACGGT
GAATACCAAA ACTGTAAAGC CAAAGGTGGC GCTTATACGC GCGAACACTT CTTTGGTAAG
TATCCTGAAA CGGCCGAAAT GGTCGCTAAC ATGTCAGATG ATGACATTTG GCGCTTAAAC
CGTGGTGGTC ATGATCCAGT TAAAGTTTAC GCTGCACTGG AACATGCACA AAAAACCAAA
GGCCGTCCAA CGGTTATCCT CGCTAAAACC GTTAAAGGTT ACGGCTTAGG TGATGCGGGT
GAAGGTAAAA ACATCGCTCA CAACGTGAAG AAGATGGGCG TTGAGTCTAT CCGTTACTTC
CGCGATCGTT TCAATATCCC GATCCCAGAT GACCAGTTAG AAGATCTGCC TTTCTATCAC
CCAGGTCCAG ATTCTGAAGA AGTGAAGTAC ATGATGAGTC GTCGTGAAGC GCTGCATGGT
AGCGTGCCAC AACGTCGTCA AAAGTTCACT GAAGAGATGG AAGTGCCGTC ACTGAAGATT
TTCGATTCGA TTTTACAGGG CTCAAACGGC CGTGAAATTT CATCGACTAT GGCATTCGTT
CGTGTGCTGA CAGCATTGCT GAAAGACAAG AAAATTGGCA AAAACATTGT GCCAATTATT
CCTGACGAAG CCCGTACTTT CGGTATGGAA GGTCTGTTCC GTCAAGTGGG TATTTATGCT
CACGAAGGCC AAAAATACGT ACCGCAAGAC TCTGACCAAG TGGCTTATTA TCGTGAAGAT
AAAACCGGTC AAGTATTGCA AGAAGGGATT AACGAACTCG GTGCTATGTC TTCATGGGTA
TCGGCAGCGA CAAGCTACTC TGTCAACGAT ACACCTATGA TCCCGTTCTA CATCTACTAC
TCAATGTTCG GTTTCCAACG TATTGGTGAC ATGGCATGGG CTGCGGGTGA CATGCGTGCT
CGTGGTTTCT TAGTCGGTGG TACTTCAGGT CGTACAACGC TTAACGGCGA AGGTTTACAG
CATCAAGATG GTCACAGCCA CGTTTTGGCG AACACTATCC CTAACTGTAT TTCTTACGAT
CCAACCTACG GCTACGAAAT TGCCGTTGTG GTACAAGATG GTATCCGTCG TATGTACGGC
GAGAATCAAG AAGATATCTT CTACTACTTG ACCACGATGA ACGAAAACTA TGAGCAACCA
GCCATGCCAG AAGGCGCGGA AGTGGGCATA GTTAAAGGTA TCTATAAGTT AGAAACGGTT
GCGGGCTCAG GTAAAGGCAA AGTTCAGTTA ATGAGCTGTG GCACTATCCT CGAACAAACC
CGTAAAGCGG CGCAAGCACT GGCGAAAGAC TTCGGTATTA CTGCCGACGT ATTTAGCGTA
ACTAGCTTCA ACGAATTGAC TCGCGATGGT CAAGCTGCTG AACGTTGGAA CATGCTGCAC
CCAACCGAAA CGCCAAAACA AGCCTATATC AGCCAAGTGA TTTCAAGTGA TGCACCTGCA
ATCGTAGCGA CTGACTATAT GAAGATTTAC GGCGAACAGT TACGTGCTTA CATTCCTACC
GATTACAAAG TGTTAGGTAC TGACGGTTTC GGTCGTTCAG ACAGCCGCGA GAATCTGCGT
CACCACTTCG AAGTGGACGC TAAGTTCATC GTTATTGCGG CACTGAAATC ACTGGTTGAT
CGCAAAGAGC TGCCTGTCGA TGTGTTAGCA AAAGCCATTA AAGAATATGG TATCGACGCT
GACAAGATCA ATCCACAGTA CGCGTAA
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| Protein sequence | MSEDMLQDVD PLETQEWVDA LQAVLEQEGP ERAHFLLEKL IDKARRNGTH LPYNATTAYL
NTIPAGQEPH MPGNQEMERR IRAIIRWNAL AMVLRGSKKD LELGGHISSF ASSATIYDVC
FNHFFRAPNE KDGGDLVYFQ GHIAPGIYAR SFLEGRLSEE QLANFRQEVD GKGLSSYPHP
KLMPDYWQFP TVSMGLGPIQ AIYQARFLKY LTDRGLKDCS AQTVYCFLGD GECDEPEALG
AIGLAAREEL DNLVFIVNCN LQRLDGPVRG NGKIIQELEG EFRGAGWEVV KVIWGRYWDP
LLARDTSGKL LQLMEETVDG EYQNCKAKGG AYTREHFFGK YPETAEMVAN MSDDDIWRLN
RGGHDPVKVY AALEHAQKTK GRPTVILAKT VKGYGLGDAG EGKNIAHNVK KMGVESIRYF
RDRFNIPIPD DQLEDLPFYH PGPDSEEVKY MMSRREALHG SVPQRRQKFT EEMEVPSLKI
FDSILQGSNG REISSTMAFV RVLTALLKDK KIGKNIVPII PDEARTFGME GLFRQVGIYA
HEGQKYVPQD SDQVAYYRED KTGQVLQEGI NELGAMSSWV SAATSYSVND TPMIPFYIYY
SMFGFQRIGD MAWAAGDMRA RGFLVGGTSG RTTLNGEGLQ HQDGHSHVLA NTIPNCISYD
PTYGYEIAVV VQDGIRRMYG ENQEDIFYYL TTMNENYEQP AMPEGAEVGI VKGIYKLETV
AGSGKGKVQL MSCGTILEQT RKAAQALAKD FGITADVFSV TSFNELTRDG QAAERWNMLH
PTETPKQAYI SQVISSDAPA IVATDYMKIY GEQLRAYIPT DYKVLGTDGF GRSDSRENLR
HHFEVDAKFI VIAALKSLVD RKELPVDVLA KAIKEYGIDA DKINPQYA
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