| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3929 |
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| Symbol | |
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| ID | 5370167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 4667825 |
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| End bp | 4670038 |
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| Gene Length | 2214 bp |
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| Protein Length | 737 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640832193 |
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| Product | patatin |
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| Protein accession | YP_001368115 |
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| Protein GI | 153002434 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000709115 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTCAAC TACTCGCTTC TATTATTTTG TGTTTGTGCA TGACTCCGTC GATGGCGGCA
GAGCGCCTTA AAATTGGTGT CGTACTCAGT GGCGGCGGTG CTAAAGGCGC TGCCCATGTG
GGGGTGCTCA AAATATTAGA AGAACATAAC ATCCCAGTCG ATTACATCGC GGGCACCAGT
ATCGGTGCCT ATGTCGCAGG CATGTACTCC TTGGGTTACA GCGCCAGCGA AGTCGAAGCG
ATCATGATGG GCGTTGATTG GGACAGTGGC TACTCGGATA CTATCCCGCG CAATATTTTG
AGTTATAGGG ATAAACAGTT ACGCGATCGA TACAACATTC CGCTGAACAT TGGTTATAAC
GAAGGCCAAG TAAGGGCGCC AAGTGGGTTG CTGCGTGGTC AGACTATGTC GCAGCTTCTA
CGTCAGTCTA CCGATCTAGT ACAGCAATTT GGTAATTTCG ATGATTTAGC TATTCCCTAC
CGCGCAGTGG CGACCGATTT AGAAACCAGC TTACCTGTGG TGATCAGTCA CGGCAGTATG
GTCAAAGCCA TGCAAGCCTC TGCGACAGTT CCCGGTGCGC TGCAGCCCGC TCAAATTGAC
GGTAAGTTAT TGGTCGATGG CGGTATTGCC AACAATATGC CTGTCGATGT CGTTAAGGCC
ATGGGCGCCG ATATTATTAT TGCCGTCGAT ATTGGTTCAC CTCTGGTCAA AAAAGATAAA
TTAGACAGCA CTATTGCCGT GCTCGATCAG CTCTCCAACT TTTTGACCAA TGCCAGCACC
GAAAAACAAA AACTACTGCT GACTGATAAA GATGTGTTGA TCCGTCCCGC GATCGACGCC
TTGAGCACCA CTGATTTCAC TATCATGCCC TTGGCATTAA CCCTCGGCAA AGAAGCCGCT
AATGGACAGC TTGATAAGCT GAGCAGCATG AGTGTGAGCC CTGAGGAATA TGCCGCCTAC
GTCGAGGCCA AAAAAGCCAA AGGTAAGTTG TTAATGGCAG ATGTGCGTCA TTCTGTTAAT
GAAATTGTCT TCGATAACCA ATCTAAGGTG AGTCTGAATC TCTTAACGGA AACCTTAAAC
ATTAAACCTG GGCAAGCTGT GTCTAAGGAC GAGCTGAATG AGGCGTTAAA GCGTATTTAC
TCCCTCAATA AGTTTGAGCG TGTCGATGCT GAGTTTGTCG AGGGTGAAGA TGGCCGCGTA
CTGACTGTGA CCACTAAAGC TAAGTCTTGG GGGCCAAATT ATTTCCAACT GGGCTTTAAC
TGGGAGGATG ATTTTAACTC TGAATCTGCC ATCAGTTTTG ACATGGCCTA TACCATGACG
GATTTGACCT TCAATGGCGG CGAATGGCGC AATGAAATCA AACTCGGTAT GGAAAAGTTG
TTTGCGACTG AGTTCTATCA GCCATTAGAC AGAGACCAAC AATTCTTTAG CCGCGCCCGT
TATCAATACG ATACCCGTAA TTGGGACTTA TACGATAACA ACAATCGCCT GCTCACCTTT
GACAAGAAAA CCCACACCAT AGAACTGGGT ATCGGCTACA ACTACACCTC ACAGGGCATG
ATTGAGCTGG GTTTAGTGGC GGAGAAGGGC GCGATAATTA ATGATGCTTG GCTTTCAAGG
GACTTGGATT TTAGCTCCTA TGGAGCTTAC TTTAGATTCG GCTACGACAG CTTAGACAGT
ATTAGTTTCC CGACGTCGGG TAATCGCGTG ACCTTAAACG TCTATGTGCG CAATGAAGAT
TTCGATGACA TTATCGACGA TAACCAAAAC CAATACAGTG TGCAGATAGA GGCCGACTGG
AAGGGCGCCT TGAGTGTCGG CAATCATGCT TTTGTGGGTA AGGCATCGAT TTCAACCAAC
GATAATGATG GGATGAATAC GCTGCATCTA TCTGAGCTGG GCGGATTTTT AAATCTATCT
GGTTACCATA AAGACTCACT GACAGGCGCG CATAAAGTCT TTGGCGCCTT TGTTTATCAA
TATGATCTCG GGCGTGATGC GCTCGGAATG ACAGATTATC CTTTGTATTT AGGTTGGAGT
TTGGAAGCGG GCAATGTCTG GGATGAGCGC TCTGAAGTCA CTCTCACTGA TCTGATTTAT
GCATCGAGTC TCTACATTGG TACTGATACT TCCATGGGAC CTGCGGCAAT CGGCTTTGGG
ATCACAGATC TTGGCGATAA GTCCTTCTAT TTATTTGTGG GTAAAAACTT CTAG
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| Protein sequence | MRQLLASIIL CLCMTPSMAA ERLKIGVVLS GGGAKGAAHV GVLKILEEHN IPVDYIAGTS
IGAYVAGMYS LGYSASEVEA IMMGVDWDSG YSDTIPRNIL SYRDKQLRDR YNIPLNIGYN
EGQVRAPSGL LRGQTMSQLL RQSTDLVQQF GNFDDLAIPY RAVATDLETS LPVVISHGSM
VKAMQASATV PGALQPAQID GKLLVDGGIA NNMPVDVVKA MGADIIIAVD IGSPLVKKDK
LDSTIAVLDQ LSNFLTNAST EKQKLLLTDK DVLIRPAIDA LSTTDFTIMP LALTLGKEAA
NGQLDKLSSM SVSPEEYAAY VEAKKAKGKL LMADVRHSVN EIVFDNQSKV SLNLLTETLN
IKPGQAVSKD ELNEALKRIY SLNKFERVDA EFVEGEDGRV LTVTTKAKSW GPNYFQLGFN
WEDDFNSESA ISFDMAYTMT DLTFNGGEWR NEIKLGMEKL FATEFYQPLD RDQQFFSRAR
YQYDTRNWDL YDNNNRLLTF DKKTHTIELG IGYNYTSQGM IELGLVAEKG AIINDAWLSR
DLDFSSYGAY FRFGYDSLDS ISFPTSGNRV TLNVYVRNED FDDIIDDNQN QYSVQIEADW
KGALSVGNHA FVGKASISTN DNDGMNTLHL SELGGFLNLS GYHKDSLTGA HKVFGAFVYQ
YDLGRDALGM TDYPLYLGWS LEAGNVWDER SEVTLTDLIY ASSLYIGTDT SMGPAAIGFG
ITDLGDKSFY LFVGKNF
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