| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3892 |
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| Symbol | uvrD |
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| ID | 5372178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 4615962 |
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| End bp | 4618130 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640832153 |
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| Product | DNA-dependent helicase II |
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| Protein accession | YP_001368079 |
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| Protein GI | 153002398 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01075] DNA helicase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGTAT CTTCTTTACT AGACGGCCTG AATGATAAGC AGCGCGAGGC TGTCGCGGCA
CCGCAATCTA GCATGTTAGT GTTGGCGGGC GCGGGCAGTG GTAAAACTCG GGTGTTGACC
CACCGCATTG CGTGGCTGAT GCAGGTTGAA CAGCAGAGTC CTTACTCGAT TCTTGCGGTG
ACATTTACCA ATAAAGCTGC GGCTGAGATG CGCGAGCGAG TTGAAAAAGT CGCTGGCACC
AATATGGGCC GCATGTGGAT TGGCACTTTC CACGGCTTGG CGCATCGCTT ATTACGCACT
CACTTCCAAG ATGCGGGTTT ACCGCAAAGC TTCCAAATCC TCGATTCTGA CGATCAAGTA
CGCTTGATCA AACGTATTCT AAAAAGCCTG AATTTGGATG AGAAACAATA TCCTCCACGC
CAAGCTCAGG GTTATATCAA TGGTAAAAAA GACCAAGGAT TACGCCCTAA ACATATCGAT
GCGGGCGGTT TTCCGCTTGA GCAAAATCTG TTAAAAATCT ATCAGGTTTA TCAAGAGTCT
TGCGACCGCG CTGGTTTAGT CGATTTTGCC GAAATCCTAT TACGTGCCCA TGAGTTATGG
CTCAATAAGC CGCACTTGTT GGCCCATTAT CAAGACAGAT TCAAGCATAT TTTGGTGGAC
GAGTTCCAAG ATACCAACGC CATTCAATAC GCGTGGATCC GCGTGCTTGC CGGTCAAACT
GCCAATGTAA TGATAGTCGG TGATGACGAC CAATCGATTT ACGGTTGGCG CGGTGCTCAG
GTTGAAAACC TACATAGATT CTTAAAAGAT TTCCCGACGG CGACCACGAT TCGCCTCGAG
CAAAACTATC GCTCGAAGGG CAATATTCTT AAAGCGTCCA ACGCCTTAAT CGCCAATAAC
CCTGAACGTA TGGGCAAAGA GTTGTGGACG GATGAAGCCG ATGGCGATCC AATTTCGCTC
TATTGCGCCT TTAATGAAAT GGACGAGGCG CGCTTTATTG TCGGTCGGAT TAATGATTGG
CACGAAAAGG GCGGCAACCT CAGTGATTGT GCGATTCTAT ATCGTTCTAA CGCTCAGTCG
CGGGTATTGG AAGAAGCCTT ATTACACAAA GGCTTAGCTT ATCGAATCTA CGGCGGTTTA
CGCTTCTTCG AACGTCAAGA AATTAAAGAT GCCATGGGTT ACCTACGGCT GATCAATAAC
AAAGACGACG ATGCGGCTTT TGAGCGTGTG GTTAACACAC CGCCCCGTGG CATTGGCGAT
CGCACTTTGG ATATTTTGCG CTCAACTGCG CGTCAGCATG AATTAACCTT GTGGCAGGCA
AGTGTGCGTT TGCTCGACGA GAAAGTGCTC GCGGGCCGCG CAGCAAATTC TGTGCGTGGT
TTCATGGACT TAATCATGAC CATGCGTGAA GACACTCAAG ATATGGTGCT GTATCGCATG
GCCGATACTG TGATCCAAGC TTCGGGTCTT AAGGCCATGT ATGAGGCCGA AAAGGGTGAA
AAAGCCCACG CTAGAATCGA AAACTTAGAA GAACTCGTCA CGGCGGCACG TACTTTTGAG
CTACCAGAAG AGCTGGAGGA CATGGGCGAA CTTAACGGTT TCCTCTCCCA CGCGGCGCTC
GAAGCGGGCG AAGGCCAAGC CGATGCCTTT ACCGATGCGG TGCAGCTAAT GACGCTGCAT
TCTGCCAAAG GGCTAGAGTT CACTATGGTG TTCATGGCGG GGGTCGAAGA AGGGATCTTC
CCGAGTAAAA TGGCGCTCGA AGAGGGCGAT AGACTCGATG AAGAACGCCG CCTCTGCTAT
GTGGGCATGA CCCGCGCCAT GGAAAAACTC TATATTACCT ATGCGGAATC GCGCCGCATT
TATGGCCGCG AAGATTACGC GAGGCCGTCG CGTTTTATCA AAGAGATCCC ACCGCAATAT
GTGGATGAAA TCCGCCTCAA GGCGCAGGTT TCAACCCCGA TGGCGAATAA TCGTTTTAGC
ACCCAAAAGT CGGCAGCCAC AAACGATACG GGTTTCAACG TCGGCCAACG AGTCAATCAC
CCTAAATTTG GTGAAGGCAA GGTGACCAAC TTTGAGGGCA GCGGCGCCCA AGGGCGAGTA
CAAGTGAGCT TTACTGACTT TGGCAGCAAG TGGTTAGTCG TGGCTTACGC TCGTTTAGAA
GCACTGTGA
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| Protein sequence | MDVSSLLDGL NDKQREAVAA PQSSMLVLAG AGSGKTRVLT HRIAWLMQVE QQSPYSILAV
TFTNKAAAEM RERVEKVAGT NMGRMWIGTF HGLAHRLLRT HFQDAGLPQS FQILDSDDQV
RLIKRILKSL NLDEKQYPPR QAQGYINGKK DQGLRPKHID AGGFPLEQNL LKIYQVYQES
CDRAGLVDFA EILLRAHELW LNKPHLLAHY QDRFKHILVD EFQDTNAIQY AWIRVLAGQT
ANVMIVGDDD QSIYGWRGAQ VENLHRFLKD FPTATTIRLE QNYRSKGNIL KASNALIANN
PERMGKELWT DEADGDPISL YCAFNEMDEA RFIVGRINDW HEKGGNLSDC AILYRSNAQS
RVLEEALLHK GLAYRIYGGL RFFERQEIKD AMGYLRLINN KDDDAAFERV VNTPPRGIGD
RTLDILRSTA RQHELTLWQA SVRLLDEKVL AGRAANSVRG FMDLIMTMRE DTQDMVLYRM
ADTVIQASGL KAMYEAEKGE KAHARIENLE ELVTAARTFE LPEELEDMGE LNGFLSHAAL
EAGEGQADAF TDAVQLMTLH SAKGLEFTMV FMAGVEEGIF PSKMALEEGD RLDEERRLCY
VGMTRAMEKL YITYAESRRI YGREDYARPS RFIKEIPPQY VDEIRLKAQV STPMANNRFS
TQKSAATNDT GFNVGQRVNH PKFGEGKVTN FEGSGAQGRV QVSFTDFGSK WLVVAYARLE
AL
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