Gene Shew185_3847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3847 
Symbol 
ID5373514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp4564068 
End bp4567274 
Gene Length3207 bp 
Protein Length1068 aa 
Translation table11 
GC content54% 
IMG OID640832108 
ProductCzcA family heavy metal efflux protein 
Protein accessionYP_001368034 
Protein GI153002353 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3696] Putative silver efflux pump 
TIGRFAM ID[TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGCAAA AAGTGATCGA AGCCGCGATT AAAAATCGGC TGTTAGTGGT GTTGGCCTTG 
CTCGCCATGA TAGTGGCAAG CGTGGTGATG CTGCCTAAAT TGAATCTCGA TGCCTTTCCC
GATGTGACTA ACGTGCAAGT GACTATCAAT ACTGCGGCCG AAGGGTTAGC CGCAGAAGAG
GTGGAAAAAC TTATCAGTTA TCCGGTGGAA TCGGCCATGT ACGCCTTGCC AGCTGTGACT
GAGGTGCGCT CGTTATCGCG CACTGGCTTG TCGATTGTGA CTGTGGTATT TGCCGAAGGG
ACGGATATTT ACTTCGCCCG TCAGCAAGTG TTTGAGCAGT TGCAAGCGGC GCGGGAGATG
ATCCCAAGCG GCGTCGGTGT GCCGGAAATC GGCCCGAATA CTTCGGGATT AGGGCAGATT
TATCAGTATA TTCTGCGCGC CGAACCTAAC TCAGGTATCG ATGCCGCCGA GCTGCGCAGT
TTGAATGATT ATCTTGTGAA ACTCATCATG ATGCCCGTCG GCGGCGTGAC GGAAGTCTTG
TCTTTTGGTG GCGATGTGCG CCAATACCAA GTGCAGGTCG ACCCGAATAA ACTGCGCGCC
TATGGCTTGT CGATGGCGCA AGTTACCGAG GCATTAGAGA GCAATAACCG CAACGCTGGC
GGTTGGTTTA TGGACCAAGG CCAAGAGCAA CTTGTGGTGC GCGGCTACGG CATGTTGCCT
GCAGGAGCAG AAGGCTTAGC GGCGATCGCA CAGATCCCGC TTACGGAGGA TAAAGGCACG
CCCGTGCGGG TGGGCGATAT CGCTCAGGTG GATTTTGGCA GTGAAATTCG TGTCGGCGCT
GTGACTATGA CTCGCCGCGA TGAGGCTGGC AACGTACAAA ACCTCGGCGA AGTGGTGGCG
GGGGTAGTGC TTAAACGCAT GGGCGCCAAC ACCAAAGCGA CTATTGATGA TATCGGCGCG
CGGGTGAGTC TTATCGAGCA GGCCTTGCCC GATGGCGTGT CTTTTGAAGT GTTTTACGAT
CAAGCCGAAC TGGTCGATAA GGCCGTGACC ACAGTGCGCG ATGCGTTGTT AATGGCCTTT
GTGTTTATCG TGGTGATCTT GGCGCTGTTC CTCGTCAATA TCCGCGCAAC CTTGCTGGTG
CTCTTGTCTA TTCCTGTGTC TATCGGGCTC GCGCTCATGG TGATGTCCTA CTATGGATTG
TCGGCAAACC TGATGTCGCT GGGCGGTTTA GCCGTGGCGA TTGGTATGTT AGTCGATGGT
TCCGTGGTTA TGGTAGAGAA CATTTTCAAA CACTTAACTC AGCCGGATCG TCGACATTTG
CTGGAGGCGA GAACGCGCGC CGATGGTGAG GCAGACCCAT ATCATAGCGA TGAGGACGGT
GGTCAGCAGG CCAATATGGC TGTGCGCATC ATGCTCGCGG CCAAAGAGGT GTGTAGTCCA
ATCTTCTTCG CGACGGCGAT TATCATAGTG GTATTTGCGC CACTGTTTGC CCTCGAAGGC
GTTGAAGGCA AGCTGTTCCA GCCGATGGCG GTCAGTATCA TTCTGGCAAT GATATCAGCG
CTGCTGGTGG CCTTGATTGC CGTGCCAGCC CTTGCTGTGT ATTTGTTCAA GCGGGGTGTG
GTGCTCAAAC AAAGCGTGGT CTTAGCGCCG CTGGATGCCG CTTATCGCAA GCTACTGACG
GCAACACTTG CTAGGCCAAA GGTAGTGATG CTCAGTGCCT TATTGATGTT TGCTTTAAGT
TTATTGTTAC TGCCAAGGCT TGGCACTGAA TTTGTGCCTG AGCTGGAGGA AGGCACGATT
AACCTCAGGG TCACGCTGGC ACCAACCGCG AGTTTGGGCA CGTCTTTGGC AGTCGCGCCC
AAACTTGAAG CTATCTTGCT GGCCTTTCCC GAGGTGGAAT ATGCCCTGAG CCGCATTGGT
GCGCCTGAGC TTGGCGGCGA TCCTGAGCCT GTGAGTAATA TCGAGGTTTA TATTGGACTT
AAGCCAATAT CTGAATGGCA ATCGGCAAGT TCGCGCTTAG AGTTACAACG TTTGATGGAG
GAAAAACTCA GTGTGTTCCC CGGACTCTTG CTGACTTTCT CGCAACCGAT TGCGACTCGG
GTAGATGAAT TACTCTCGGG GGTAAAAGCC CAGTTAGCGA TCAAAATCTT CGGCCCAGAT
TTAGCGGTAT TGTCTGAGAA AGGCCAAGCG CTCACCGATC TTGTCGCGAA AATTCCCGGT
GCCGTCGATG TGTCATTAGA GCAAGTGAGT GGAGAAGCGC AATTGGTTGT GCGGCCCAAA
CGCGAGTTAT TGGCGCGCTA CGGCATTAGT GTCGATCAAG TGATGAGCCT TGTCAGCCAA
GGCATTGGCG GCGCGAGTGC AGGTCAAGTA ATTGACGGCA ACGCCAGATA CGACATCAAT
GTGCGCCTCG CGGCCGAGTT TCGCACTAGC CCAGATGCGA TTAAGGACTT GTTACTCAGC
GGCACGAATG GCGCCACTGT GCGCTTAGGC GAAGTCGCCA GCGTCGAAGT AGAAATGGCG
CCGCCGAATA TTCGCCGTGA CGACGTGCAG CGCCGAGTGG TGGTGCAGGC CAACGTGGCG
GGGCGCGATA TGGGCTCTGT GGTGAAAGAC ATTTATGCTT TAGTGCCTCA GGCTGATTTA
CCCGCGGGAT ATACAGTGAT CATTGGCGGC CAGTATGAGA ATCAGCAGCG GGCGCAGCAA
AAGCTGATGC TAGTGGTGCC GATCTCTATC GCCTTGATTG CCTTGCTGTT GTACTTCTCC
TTTGGTTCAT TCAAGCAAGT GTTGCTCATT ATGGCGAACG TACCCTTAGC CTTGATTGGC
GGCATAGTGG CCCTGTATGT CAGTGGCACT TATTTGTCAG TGCCTAGCTC CATTGGCTTT
ATCACCTTAT TTGGGGTAGC CGTGCTCAAC GGTGTGGTGT TGGTGGATTC GATTAATCAG
CGCAGGCAAA GCGGCGAAGC ACTCTATGAT TGTGTTTATG AGGGCACGGT TGGGCGTTTG
CGCCCCGTGT TGATGACGGC ATTGACCTCG GCCTTAGGCT TGATCCCGAT CCTATTGTCA
TCGGGGGTTG GCAGTGAAAT CCAAAAGCCG CTGGCAGTGG TGATAATTGG TGGCTTGTTC
AGCTCCACGG CGCTGACCTT GCTAGTGTTG CCGACCTTAT ATCGCTGGTT ATATCGTGGC
GACAAGCGCA TCGATGAGCT TGATTAA
 
Protein sequence
MLQKVIEAAI KNRLLVVLAL LAMIVASVVM LPKLNLDAFP DVTNVQVTIN TAAEGLAAEE 
VEKLISYPVE SAMYALPAVT EVRSLSRTGL SIVTVVFAEG TDIYFARQQV FEQLQAAREM
IPSGVGVPEI GPNTSGLGQI YQYILRAEPN SGIDAAELRS LNDYLVKLIM MPVGGVTEVL
SFGGDVRQYQ VQVDPNKLRA YGLSMAQVTE ALESNNRNAG GWFMDQGQEQ LVVRGYGMLP
AGAEGLAAIA QIPLTEDKGT PVRVGDIAQV DFGSEIRVGA VTMTRRDEAG NVQNLGEVVA
GVVLKRMGAN TKATIDDIGA RVSLIEQALP DGVSFEVFYD QAELVDKAVT TVRDALLMAF
VFIVVILALF LVNIRATLLV LLSIPVSIGL ALMVMSYYGL SANLMSLGGL AVAIGMLVDG
SVVMVENIFK HLTQPDRRHL LEARTRADGE ADPYHSDEDG GQQANMAVRI MLAAKEVCSP
IFFATAIIIV VFAPLFALEG VEGKLFQPMA VSIILAMISA LLVALIAVPA LAVYLFKRGV
VLKQSVVLAP LDAAYRKLLT ATLARPKVVM LSALLMFALS LLLLPRLGTE FVPELEEGTI
NLRVTLAPTA SLGTSLAVAP KLEAILLAFP EVEYALSRIG APELGGDPEP VSNIEVYIGL
KPISEWQSAS SRLELQRLME EKLSVFPGLL LTFSQPIATR VDELLSGVKA QLAIKIFGPD
LAVLSEKGQA LTDLVAKIPG AVDVSLEQVS GEAQLVVRPK RELLARYGIS VDQVMSLVSQ
GIGGASAGQV IDGNARYDIN VRLAAEFRTS PDAIKDLLLS GTNGATVRLG EVASVEVEMA
PPNIRRDDVQ RRVVVQANVA GRDMGSVVKD IYALVPQADL PAGYTVIIGG QYENQQRAQQ
KLMLVVPISI ALIALLLYFS FGSFKQVLLI MANVPLALIG GIVALYVSGT YLSVPSSIGF
ITLFGVAVLN GVVLVDSINQ RRQSGEALYD CVYEGTVGRL RPVLMTALTS ALGLIPILLS
SGVGSEIQKP LAVVIIGGLF SSTALTLLVL PTLYRWLYRG DKRIDELD