| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3837 |
|---|
| Symbol | |
|---|
| ID | 5372137 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 4555932 |
|---|
| End bp | 4556627 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640832098 |
|---|
| Product | isochorismatase hydrolase |
|---|
| Protein accession | YP_001368024 |
|---|
| Protein GI | 153002343 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1335] Amidases related to nicotinamidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 55 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG TAGCAATATG CAGTGCTCTG GCACTTTCGA TGGCGAGTGC AACGGCCAGC
GCAGGGACAA GTAATAAAGT ATCGGCACCG ACAATCCGCA CCATGACTCA GGCGCAAGCG
CCAACGGAAC TGAATGCGAA CACGACAGCT GTATTGGTGA TTGATTTTCA AAACGAATAT
TTCACTGGCA GCATGCCGAT CCCGAACGGC AAGCAAGCGT TGGGCAAAGC CAAGCAAGTG
GTTAAATTTG CGCACCAGAA TGCGATGCCA GTTTATTTTG TGCGTCATTT AGGACCAGCT
GCTGGGCCAC TATTTGCGGA AGGCAGCGTT AACGCTGAGT TTCATCAGGA TCTACAACCG
CTAGATATTG ATTTTGTTAT CAATAAGGCG ACGCCGAGTT CGTTTGTGGG AACTAATCTT
GATCAACAAC TGAAAGATAA GGGCATTAAA ACACTGGTGA TTACTGGGCT GATGACGCAC
ATGTGCGTGT CGAGCGCGGC GCGTGATGCT GTGCCTATGG GTTATGATGT GATCATTGCA
GAAGACGCCA CCGCCACTCG CGATCTGGCA ACTTGGGACG GTTCTATCGT AGATCACGCC
ACGCTGCAAC GTGCTGCAAT AGCGGGTGTT GCCGATGTTT TTGCTGAGAT TAAAACTACT
CAAGCGGTGC TCAACATGCC AGTGGTGCGA CTGTAA
|
|---|
| Protein sequence | MKKVAICSAL ALSMASATAS AGTSNKVSAP TIRTMTQAQA PTELNANTTA VLVIDFQNEY
FTGSMPIPNG KQALGKAKQV VKFAHQNAMP VYFVRHLGPA AGPLFAEGSV NAEFHQDLQP
LDIDFVINKA TPSSFVGTNL DQQLKDKGIK TLVITGLMTH MCVSSAARDA VPMGYDVIIA
EDATATRDLA TWDGSIVDHA TLQRAAIAGV ADVFAEIKTT QAVLNMPVVR L
|
|---|
| |