Gene Shew185_3818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3818 
Symbol 
ID5369824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand+ 
Start bp4534918 
End bp4535610 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content49% 
IMG OID640832079 
Producthypothetical protein 
Protein accessionYP_001368005 
Protein GI153002324 
COG category 
COG ID 
TIGRFAM ID[TIGR02001] conserved hypothetical protein, proteobacterial 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAT CACTGTACAG CGTTTTGGCC TTATCGACGG GAATGTTACT GGCTGGCAAT 
GCCTTTGCAG CCGTATCAGG CAACATTGGT GGTACCTCTA ATTACCTATG GCGCGGCGCG 
ACCCAAACTA ACGATGCAGT CGCAATCCAA GGTGGAATTG ACTACAGCCA TGATTCTGGC 
TTCTATGCTG GCACTTGGGC ATCGAATGTA GATTTTGGTG ACGATACGAG CTACGAGCTG 
GATCTCTACG CGGGTTATGG CGGCAGTATT ACCGAAGACA TCAGCTACGA CTTTGGCTAC 
CTCTACTACG CCTATCCAGA CGCTCCTGGC AGCATTGATT TTGGTGAACT CCATGCTGCA 
GTGACTTGGA AGTGGCTTGA ACTGGGTTAC TCCCATGTCA TCAATGCCGG TGACGATGTC 
GCCGCCGATC CGTTAGATAA TAAAGATCTT AGCTATCTTG CCGCGACTGT CTCTGTGCCT 
CTCACTGAAA AGCTCAGCTT ATCAGTACAC TATGGCTACT CAAGCGGTGA TGTTGTGCAA 
TCTTGGTTTG GCGAAGATAA CTACGCCGAC TATAACGTCA CACTCAGCGC AGATACCAGC 
ATGGGCACAG TGTCATTTAT GGTTTCTGAT ACCGACCTCA CCGATGATGA TGCCAAACTG 
GTACTCGGCT ATTCCTACAG CTTTGATCTC TAA
 
Protein sequence
MKKSLYSVLA LSTGMLLAGN AFAAVSGNIG GTSNYLWRGA TQTNDAVAIQ GGIDYSHDSG 
FYAGTWASNV DFGDDTSYEL DLYAGYGGSI TEDISYDFGY LYYAYPDAPG SIDFGELHAA 
VTWKWLELGY SHVINAGDDV AADPLDNKDL SYLAATVSVP LTEKLSLSVH YGYSSGDVVQ 
SWFGEDNYAD YNVTLSADTS MGTVSFMVSD TDLTDDDAKL VLGYSYSFDL