| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3807 |
|---|
| Symbol | |
|---|
| ID | 5372490 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 4526697 |
|---|
| End bp | 4527470 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640832068 |
|---|
| Product | methyltransferase type 11 |
|---|
| Protein accession | YP_001367994 |
|---|
| Protein GI | 153002313 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.000356198 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCAAGATA AGAATTTTGA TAAGCTCGCG CAAAAATTTG CGAAAAATAT TTATGGTACG
CCTAAAGGCG ACATTCGTGC CGCTGTACTG TGGCGCGACC TCGCACCTGC GCTAGCAAAA
CTGGGGGATA GAAAACTCAG AGTATTAGAT GCGGGCGGCG GTTTTGGTTA CTTTAGCCAA
AAATTAGCCC GCCTCGGCCA CGAAGTGGTG CTGTGCGATA TCTCAGCGGA GATGTTGGCG
CAAGCGCAAG AACAGATAGA TGCCTCGCCT GAACCATTAG CTATCCAGCT TATCCATGCG
CCTATTCAAG ATCTGTCAGT TGAGCAACAT GGCTATTTCG ATATCATATT GTGCCATGCC
GTCGTCGAAT GGTTAACGGA TGCTAAGCCC ACGATGGCGG GCCTACTCAC TATGCTTAAA
CCCGCGGGAT TATTCTCTTT GATGTTTTAC AACAAAGAGG CCATGCGTTT TCATGCCTTA
GTGTCGGGTA ATTTCGATTA CGTCGCCGCA GATTTAAAAG TGAAAAAGAA AGTGCGGCTA
ACACCCACTC ATCCACTTTA TATTCAAGAG GTTAAAGAGT GGTTTAGCGA CTGGCAAATG
TCACTCATCT GTCAGTCTGG CGTGCGGGTG ATCCACGACT ATTTGAAAAA GAGTCAGCCC
GCCGATTTCG ATTATCAAAA ACTGCTACAA ATGGAGCTCG AGTATTCACA ACGCGAGCCC
TACATTTCCC TCGGCCGATA TGTGCACTTT TTAGGGCAAA GCCCCGCAGT TTGA
|
|---|
| Protein sequence | MQDKNFDKLA QKFAKNIYGT PKGDIRAAVL WRDLAPALAK LGDRKLRVLD AGGGFGYFSQ
KLARLGHEVV LCDISAEMLA QAQEQIDASP EPLAIQLIHA PIQDLSVEQH GYFDIILCHA
VVEWLTDAKP TMAGLLTMLK PAGLFSLMFY NKEAMRFHAL VSGNFDYVAA DLKVKKKVRL
TPTHPLYIQE VKEWFSDWQM SLICQSGVRV IHDYLKKSQP ADFDYQKLLQ MELEYSQREP
YISLGRYVHF LGQSPAV
|
|---|
| |