| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3797 |
|---|
| Symbol | |
|---|
| ID | 5370983 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 4516335 |
|---|
| End bp | 4517135 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640832058 |
|---|
| Product | ABC-3 protein |
|---|
| Protein accession | YP_001367984 |
|---|
| Protein GI | 153002303 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.48799 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGATC TTGAACTGAT GTCGATTCTG TTGCCTGCAT TGGCAGCGGG GATCTTAGTG
TTGTCGACGC ATATTGTACT TGGGAGACAA GTACTTAAGC GTGGCATCAT CTTTATCGAT
TTAGCGATAG CGCAAGTTGC CGCCTTAGGC GCGATTGTCG CTCACATGGA CCACAGATTA
GAAGACATGC CGTTTGCTAA TGTGTGGATG CCAGCGCTGT TTGCCCTCGC GGGCGCAGGG
TTTATCGCTT GGTTATCTAA GCGGATGGCG GGTGAGTTGG AGGCAATGAT CGGCTGCTTT
TATGTGTTGT CTGCGGTAGC GGCTATGTTG CTGCTGGCGA ACGACCCACA CGGCGCCGAG
CTGTTAAAGC AATTGATGTC AGGTCAGATC CTGTGGGTGA GTTGGTCACA ACTGATTTTG
CCGGCAGTGG TGTATTCACT GGTGTTATTG GCGATATTCC TGCGTCCCCA GATTTTGGAT
GGTGCAGGGT TCTATCTGCT ATTTGCGCTG GTCATTACCT TGTCGGTTGA ATTAGTGGGC
GTTTATCTGG TGTTCAGTAC CTTGATATTG CCCGCTTTAG CACTGAACAA GTACCGCGGT
AAAGGTCGGT TATTTTACGC TTACCTCGTC GGTTTGTTGG GCTATGTTCT AGGATTAGTC
CTGTCGGCGA CGTTAGATCT GCCCAGCGGT GCGGCGATTG TCGCGACTTT GGCCGTGAGC
GCCTTAGTGA TCCGTTTTGT GTTAGCTAAA GCTGCGCCTC AGGCAACGGG ATCTGAAATC
CTGCCAAAGC ACCACGCTTA G
|
|---|
| Protein sequence | MFDLELMSIL LPALAAGILV LSTHIVLGRQ VLKRGIIFID LAIAQVAALG AIVAHMDHRL
EDMPFANVWM PALFALAGAG FIAWLSKRMA GELEAMIGCF YVLSAVAAML LLANDPHGAE
LLKQLMSGQI LWVSWSQLIL PAVVYSLVLL AIFLRPQILD GAGFYLLFAL VITLSVELVG
VYLVFSTLIL PALALNKYRG KGRLFYAYLV GLLGYVLGLV LSATLDLPSG AAIVATLAVS
ALVIRFVLAK AAPQATGSEI LPKHHA
|
|---|
| |