Gene Shew185_3774 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3774 
Symbol 
ID5372200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand- 
Start bp4484607 
End bp4485152 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content45% 
IMG OID640832035 
Productoligoribonuclease 
Protein accessionYP_001367961 
Protein GI153002280 
COG category[A] RNA processing and modification 
COG ID[COG1949] Oligoribonuclease (3'->5' exoribonuclease) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00192179 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGCAG ATGTAAATAA TCTCATTTGG ATCGATTTGG AAATGACAGG GTTAGAGCCC 
GACGTCGACA GGATCATTGA AATTGCCACT TTAGTGACAG ATCAAGAACT CAATATTATC 
GGTCAAGGTC CGGTTATCGC GATTCATCAA TCGGATGACG TGCTGGCCGC TATGGATGAT 
TGGAATCAAA AGCACCATGG TGAGTCAGGG TTGATTGACC GCGTACGTGC TAGCCAAGAA 
ACCGAAGCGC AAGCCGTGGC TAAGACGATT GCCTTCTTAG AACAGTATGT TCCTAAGGGC 
GCTTCTCCAA TGTGTGGTAA CAGTATTGGC CAAGATAGAC GCTTCTTAAA TCGTTATATG 
CGCGAGCTGG AAGATTATTT CCACTACCGC AATGTGGATG TCAGTACGAT TAAAGAGCTA 
GTGAAGCGTT GGAGCCCAGA AACTATGGCG GGCTTTAAGA AGCAAAACAC TCACCAAGCA 
CTGCAGGATA TCCAAGAGTC GATCGCTGAA TTGCAGTATT ATCGCAGCAA AGTATTTAAA 
ATTTGA
 
Protein sequence
MTADVNNLIW IDLEMTGLEP DVDRIIEIAT LVTDQELNII GQGPVIAIHQ SDDVLAAMDD 
WNQKHHGESG LIDRVRASQE TEAQAVAKTI AFLEQYVPKG ASPMCGNSIG QDRRFLNRYM 
RELEDYFHYR NVDVSTIKEL VKRWSPETMA GFKKQNTHQA LQDIQESIAE LQYYRSKVFK 
I