| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3742 |
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| Symbol | |
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| ID | 5369389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 4445264 |
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| End bp | 4447639 |
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| Gene Length | 2376 bp |
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| Protein Length | 791 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640831999 |
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| Product | penicillin-binding protein 1B |
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| Protein accession | YP_001367929 |
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| Protein GI | 153002248 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02071] penicillin-binding protein 1B |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATTCGCA CCTCGCTCAC TGTTGTGCCT GTGGCTGATG TCTTTAAATG CATGAATGAT
GAAGTAGATA TGACGACTAA GACGACAAAA AAAACACCCG CTTCCCGTAG GGCCAATAAT
GGCCGCGGTT TATTTCGACG AATGTGGTCA ATCACTTGGA AATTAGGCTT AGCCGGATTA
GCTGTAGTGA CGTTCTACAG CATTTATCTC GATCAAATTA TTGCGCAAAA ATTTGAAGGC
CAAAAATGGC ACTTGCCCGC GCAGGTGTTC AGCCGTTCTA TGGCGCTGTA TCCCGGCGCG
GCGGTCAGTC ATCCGCAAAT GATGGCTGAG CTTAAGTTGC TCGGCTATCG CAAAGTCGCG
AATCCACGCC AAGTGGGAGA GTTTTCGGCA TCGAGCACTC GTATCGAATT GTGGCGTCGA
CCGTTCTTGC ATCCTGAAGG CGATCAAGTC GAACAAAGAG TCATGATCAG CTTCGACAGC
AATGGCGTCA GTTCAGTCTC CCGGGTGTCG GACAAACGCC AGCTTGCCGT ATTCCATCTT
GAGCCTGTGT TGCTCGATCG CATTATTACT GGCGACGGTG AAGACAGGCT GTTTGTGCCG
ACCGAAGAAA TGCCTAAGTC GATTGTGCAG GCGTTATTGC TGGTGGAAGA CCGTAGCTTT
TACGAACATC ATGGGGTGAA TCCCTTCGCG ATTGCGCGCG CCGCGTTTGT AAACATTAGC
GCCGGTCGCA CAGTGCAAGG TGGCTCAACA TTAACCCAGC AGTTAGCGAA AAACTTTTTC
CTATCGAGTG AGCGTTCTTT ACTGCGTAAG GTGCGCGAAG CCTTGATGGC AGTGATTATC
GATTTTCGTT ACAGCAAGGA CGAAATCCTC GAAGCCTATC TTAACGAAGT GTATATGGGG
CAGGATAAAT CCCGCGCCGT TCATGGTATG GGTTTGGCAT CGCGTTTCTA TTTCGGCCGT
CCAATCAGTG AGTTGACTAT CGCCCAGCAG GCATTTTTAG TGGCTGCGAT TAAGGGGCCG
TCTTACTACA ATCCATGGCG ATATCCGGAG CGCATTCAAG AGCGTCGCGA TCTGGTACTG
CGTTTACTCA TGGATGCAGG CGATTTAACC ACGGCAGAGT ACAAGGCGGC GGTAGAGTCA
CCTCTGGCGA TCCGTAATCT TAATAAGCCA GCACACCAGA AATTACCTTC TTTCTTCGCC
CTGGTAAAAC AGGAAGTGAA CGAGCGTTAT GGCGATGCGT TACTGAAGCA ATCTGGGGTA
AAAATCTATA CCACGCTCGA TCCTATGGCC CAAGAAGCCG CCGAAATTGC GGTGACACAA
ACCCTTAAAA GCTTAGATAA GAGCAACAAG TCATTGCAGG TAGGCATGGT GGTTACCGAC
AAATACACGG GCGGTATCGC GGCAATGGTC GGCGATAAAA CCCCTGGATT TGATGGTTTT
AACCGCGCGG TTGAAATTCG TCGTCCGATT GGCTCGTTAA TTAAGCCCTT TGTGTACGCC
ACTGCACTGG CACCCAATAG CCAATTTACC TTAGCGACTC CCCTTAAAGA TCAGCCTATT
ACCTTAAAGA GTGAGCAAGG TAAGACATGG TCACCGCAAA ACTTCGATAA GAAGTTCAGC
GGCCAAGTGC CTTTGTTAAC GGCGCTGAAA AAATCGATGA ACGTCCCGAC AGTAAATCTT
GGGATTGCGG TGGGCGTGGA TGCCGTCGCG ACAACTTTGG CTAAGTCGGG CTGGCAGGAG
CCATTAAACG AGTATCCTTC TATGTTACTT GGCGCCGTCA ATGGCTCGCC ATTAATGGTG
GCGCAGGTGT ACCAAACCTT AGCCGATAGC GGGGTTTACC GTAAATTAAC CACAGTGACG
GCTGTATTGG ATGCTGATAA AAATCCATTG CCCGTGACGC GATTACCTAA AGAGCAGGCC
ATCTCACCCG ATACTGACTT TTTGATCCAG TACGCTATGC AGCAAGTGGT CAATACGGGC
ACAGCGACGC GCTTAGGCAA TGCCTTCCCA GGCGTTGGGC TGGCGGGTAA AACAGGCACA
AGTAACGACA GCCGCGACTC TTGGTTTGCG GGCTTTGATG AGCGTAACGT CGCTGCTATT
TGGGTGGGGC GTGATGATAA CGGCAAAACC AGCTTGTATG GCAGCAGTGG CGCCATGGCC
GTGTACCTTG CCTTCTTAAA GGAACGTCCA CCTATTAGTT TGCGTTCTAT CCAAGTGAAT
GGCGTCGTGA AGGGCTTTTT TGACCGAGAT ACCGGCGTGG CGAAGGAATC GGATTGCAGC
AATGTTGATG CGCTTCCTGC ATTAACCGCG ACTTATCGTC CGGTGAATAA TTGCGGCGAG
CCTTTGCAAT GGTGGCAGAA AATACTCGGC CAATAG
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| Protein sequence | MIRTSLTVVP VADVFKCMND EVDMTTKTTK KTPASRRANN GRGLFRRMWS ITWKLGLAGL
AVVTFYSIYL DQIIAQKFEG QKWHLPAQVF SRSMALYPGA AVSHPQMMAE LKLLGYRKVA
NPRQVGEFSA SSTRIELWRR PFLHPEGDQV EQRVMISFDS NGVSSVSRVS DKRQLAVFHL
EPVLLDRIIT GDGEDRLFVP TEEMPKSIVQ ALLLVEDRSF YEHHGVNPFA IARAAFVNIS
AGRTVQGGST LTQQLAKNFF LSSERSLLRK VREALMAVII DFRYSKDEIL EAYLNEVYMG
QDKSRAVHGM GLASRFYFGR PISELTIAQQ AFLVAAIKGP SYYNPWRYPE RIQERRDLVL
RLLMDAGDLT TAEYKAAVES PLAIRNLNKP AHQKLPSFFA LVKQEVNERY GDALLKQSGV
KIYTTLDPMA QEAAEIAVTQ TLKSLDKSNK SLQVGMVVTD KYTGGIAAMV GDKTPGFDGF
NRAVEIRRPI GSLIKPFVYA TALAPNSQFT LATPLKDQPI TLKSEQGKTW SPQNFDKKFS
GQVPLLTALK KSMNVPTVNL GIAVGVDAVA TTLAKSGWQE PLNEYPSMLL GAVNGSPLMV
AQVYQTLADS GVYRKLTTVT AVLDADKNPL PVTRLPKEQA ISPDTDFLIQ YAMQQVVNTG
TATRLGNAFP GVGLAGKTGT SNDSRDSWFA GFDERNVAAI WVGRDDNGKT SLYGSSGAMA
VYLAFLKERP PISLRSIQVN GVVKGFFDRD TGVAKESDCS NVDALPALTA TYRPVNNCGE
PLQWWQKILG Q
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