Gene Shew185_3702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3702 
Symbol 
ID5372108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp4396833 
End bp4398629 
Gene Length1797 bp 
Protein Length598 aa 
Translation table11 
GC content49% 
IMG OID640831960 
ProductABC transporter related 
Protein accessionYP_001367890 
Protein GI153002209 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5265] ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000889772 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCCAA CGTTATATTT TGAAGGTCCA GTCGATAAGT TAAACTGGCA TGTCATGAAG 
CTGCTTTGGC CTTACTTATT GGAATACAAA GGCCGTATTG CGCTGGCGAT GTCATGCCTC
ATCATCGCTA AGCTGACCAG CGTGGCTTTG CCTTTTATTT TGAAGCATTT GGTCGACACC
TTAGATGCCG ATAAAACCGC GCAAGCCCTC AGTGTGCCCG TGGGATTAGT GTTGGCCTAT
GGTGCGATTC GTTTACTGAC GGCGATTACG GGGGAGATCC GCGATACCTT GTTTGGTCGG
GTGACTGAGC GGGCGATCCG CCGTTTAGGC TTAGCGGTAT TCGAGCATTT ACACCGACTT
GATCTCGATT TTCATCTAGA GCGCAAAACC GGCGGCCTAT CCCGTGATAT TGAGCGCGGC
ACCAGTGGCG TGAGTTTCCT CATGCGGTTT ATGGTGTTCA ACATAGTGCC GACCTTGCTC
GAAATTGTCA TGGTGATTGG CATTTTCTTC TATAACTACG GGATTGCGTT TGCGGCAATC
ACCTTTATTG CTGTGTTGGC CTACATTATT TTCTCTGTGG TCGCGACCGA ATGGCGCACT
GAGTATGTAC GTGATGCCGC CAAGGCTGAT TCTTTATCAA ATACACGGGC GATTGATAGT
TTGCTGAACT ATGAAACCGT TAAGTATTTC AATAATGAGA AGTATGAGTC GCAGCGCTAC
GATCAAGCGC TCGAACAGTG GGAAGTCGCT AAACGTAAAA ACCGTTTATC TTTGTTTGCG
CTTAATGGTG GGCAAGCTGT GATTATCGCC CTGGCGATGA CAGCTATGAT GGCGCTGGCG
GCTTACCGAG TCACCTATGG CGATATGACC TTAGGTGATT TTGTGTTGAT TAATGCGTTT
ATGATGCAGC TCTTTTTACC CCTTAACTTT TTAGGTTTCG TGTATCGCGA AATTCGCGGC
GCCTTAGCCA ATATTGAGCG TATGTTTAGC CTGCTCGATA AGCATCCCAT GATAGTCGAC
TCACCCCAAG CGCTCGATTT TCAGCCTACT AAGGGCGAGC TGGTATTTGA AAACGTGAAT
TTCAGTTATG ACGAGCGGCA AATTCTGCGG GACGTGAGTT TTAAGGTCGC TGCCGGTAAA
AAGGTTGCTG TAGTGGGCGA TAGCGGAGCT GGTAAATCGA CACTGATTAA ATTGTTGTTT
CGATTTTACG ATGTGGACCA AGGCGCGATT AAAATCGATG GACAAGATAT CCGTCATCTC
ACACAAGATG CGTTGCGACG GGCCATCGCT ATCGTGCCGC AGGATACAGT GCTGTTTAAC
GATTCATTAG TTGAGAACAT ACGTTATGGT CGCCCAGGCT CGACGGATGA AGAGGTGCGC
AACGCAATTA AACTGGCGCA CTTAGAGCAA TTTATTGCAT CGCTTGCCCT TGGTTGGGAT
ACAAAGGTGG GTGAGCGCGG CTTAAAACTC TCTGGCGGAG AAAAACAGCG GGTCGCAATA
GCGAGGGCCA TTTTGAAGGG CTCACCCGTG CTGGTGTTTG ATGAGGCGAC ATCCTCGCTC
GATAGCCGCT CCGAGCAAGC GATTTTGTCG GCACTGCGGG AAGTCGCTAA AGGGCATACC
AGCCTTGTGG TGGCTCACCG ATTGTCCACT ATTGTTGATG CTGACCAAAT CGTCGTCTTG
AGCCAAGGTG AAATTGTTGA GCAAGGTAAT CATCAGACTT TGCTATTGGC AAATGGTCTA
TATGCCAAAT TATGGCGGAT ACAAAATGAG CAACAACATA CTCCTCTGAG CAGTTAA
 
Protein sequence
MRPTLYFEGP VDKLNWHVMK LLWPYLLEYK GRIALAMSCL IIAKLTSVAL PFILKHLVDT 
LDADKTAQAL SVPVGLVLAY GAIRLLTAIT GEIRDTLFGR VTERAIRRLG LAVFEHLHRL
DLDFHLERKT GGLSRDIERG TSGVSFLMRF MVFNIVPTLL EIVMVIGIFF YNYGIAFAAI
TFIAVLAYII FSVVATEWRT EYVRDAAKAD SLSNTRAIDS LLNYETVKYF NNEKYESQRY
DQALEQWEVA KRKNRLSLFA LNGGQAVIIA LAMTAMMALA AYRVTYGDMT LGDFVLINAF
MMQLFLPLNF LGFVYREIRG ALANIERMFS LLDKHPMIVD SPQALDFQPT KGELVFENVN
FSYDERQILR DVSFKVAAGK KVAVVGDSGA GKSTLIKLLF RFYDVDQGAI KIDGQDIRHL
TQDALRRAIA IVPQDTVLFN DSLVENIRYG RPGSTDEEVR NAIKLAHLEQ FIASLALGWD
TKVGERGLKL SGGEKQRVAI ARAILKGSPV LVFDEATSSL DSRSEQAILS ALREVAKGHT
SLVVAHRLST IVDADQIVVL SQGEIVEQGN HQTLLLANGL YAKLWRIQNE QQHTPLSS