Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3693 |
Symbol | |
ID | 5369583 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 4389805 |
End bp | 4390812 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640831951 |
Product | extracellular solute-binding protein |
Protein accession | YP_001367881 |
Protein GI | 153002200 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0002551 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATGGG TAACTTGCGC AGCAGTCGTT GGGTTAATGT CGGTTGGGCA TTCGGCGAAT GCTGATGATA AATTAACAGT TTATTCTTAT CGCCAAGCCT TCTTGGTGGA GCCTATTTTG ACGCGTTTCA CCGAAGAAAC CGGCATAGGT GTGAATTTGG TCTTTGCAAA AGACGGCATT GCCGAGCGTC TCGCCCGTGA AGGTCGTTTA TCCCCTGCAG ATCTGGTGTT GACCTCTGAT TTCTCACGTC TGGTTGAATT AGTCGATAAA GATCTGACTT CACCGGTTAA AAATGCCCAA CTCGAAAGCA ATATTCCTGC TCAGTATCGC GACCCCGATG GTGAGTGGTA CGCCCTGACC ATGCGAGTGC GAAATCTCTA CACGGCGAAA GATCGTTTAG GGCCGCAGCA AATTACCTAT GAAGAACTCG CCGATCCTAA ATACAAAGGC AAAATCTGTA CCCGCAGCGG TAAGCATCCA TACAACATAG CGTTAGTGGC ATCTATGATT GCCCAGCACG GCGAAGCTGA GGCGAAAACT TGGCTGGCAG GCGTGAAGAG TAACTTAGCG CGCAAGCCAC AGGGTAACGA TAGAGCCCAA GTGAAAGCGG TAAAGGAAGG CTTATGTGAT ATCGCCATCG GCAACAGCTA TTATTACGGC AACATGATGC AAGACCCTGA GCAAAAAAGC TGGGCTGAAG CGGTGACGAT TAACTTCCCG AACCAAGCCG ATCGCGGTGC CCATGTGAAC GTGTCTGGTA TGGTATTAAC CCGTCATGCA CCGAATAAAG CCAATGCGAT TAAATTGATG GAATTCTTAT CCGCCGATGT GGCTCAAAAG GCCTATGCCG ATGTGAATAT GGAATATCCA GTGAAAGCAG ATGTGGCACC TTCAACCTTA GTGGCTTCAT GGGGCGAGTT TAAGTCGGAT CAATTGCCTA TTTTCAAACT GGCCGAATAT CACCAAGCGG CGGTTAAGTT ATTAGATGAA GTGCAGTTTG ATCTCTAG
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Protein sequence | MKWVTCAAVV GLMSVGHSAN ADDKLTVYSY RQAFLVEPIL TRFTEETGIG VNLVFAKDGI AERLAREGRL SPADLVLTSD FSRLVELVDK DLTSPVKNAQ LESNIPAQYR DPDGEWYALT MRVRNLYTAK DRLGPQQITY EELADPKYKG KICTRSGKHP YNIALVASMI AQHGEAEAKT WLAGVKSNLA RKPQGNDRAQ VKAVKEGLCD IAIGNSYYYG NMMQDPEQKS WAEAVTINFP NQADRGAHVN VSGMVLTRHA PNKANAIKLM EFLSADVAQK AYADVNMEYP VKADVAPSTL VASWGEFKSD QLPIFKLAEY HQAAVKLLDE VQFDL
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