Gene Shew185_3693 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3693 
Symbol 
ID5369583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp4389805 
End bp4390812 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content48% 
IMG OID640831951 
Productextracellular solute-binding protein 
Protein accessionYP_001367881 
Protein GI153002200 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1840] ABC-type Fe3+ transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0002551 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATGGG TAACTTGCGC AGCAGTCGTT GGGTTAATGT CGGTTGGGCA TTCGGCGAAT 
GCTGATGATA AATTAACAGT TTATTCTTAT CGCCAAGCCT TCTTGGTGGA GCCTATTTTG
ACGCGTTTCA CCGAAGAAAC CGGCATAGGT GTGAATTTGG TCTTTGCAAA AGACGGCATT
GCCGAGCGTC TCGCCCGTGA AGGTCGTTTA TCCCCTGCAG ATCTGGTGTT GACCTCTGAT
TTCTCACGTC TGGTTGAATT AGTCGATAAA GATCTGACTT CACCGGTTAA AAATGCCCAA
CTCGAAAGCA ATATTCCTGC TCAGTATCGC GACCCCGATG GTGAGTGGTA CGCCCTGACC
ATGCGAGTGC GAAATCTCTA CACGGCGAAA GATCGTTTAG GGCCGCAGCA AATTACCTAT
GAAGAACTCG CCGATCCTAA ATACAAAGGC AAAATCTGTA CCCGCAGCGG TAAGCATCCA
TACAACATAG CGTTAGTGGC ATCTATGATT GCCCAGCACG GCGAAGCTGA GGCGAAAACT
TGGCTGGCAG GCGTGAAGAG TAACTTAGCG CGCAAGCCAC AGGGTAACGA TAGAGCCCAA
GTGAAAGCGG TAAAGGAAGG CTTATGTGAT ATCGCCATCG GCAACAGCTA TTATTACGGC
AACATGATGC AAGACCCTGA GCAAAAAAGC TGGGCTGAAG CGGTGACGAT TAACTTCCCG
AACCAAGCCG ATCGCGGTGC CCATGTGAAC GTGTCTGGTA TGGTATTAAC CCGTCATGCA
CCGAATAAAG CCAATGCGAT TAAATTGATG GAATTCTTAT CCGCCGATGT GGCTCAAAAG
GCCTATGCCG ATGTGAATAT GGAATATCCA GTGAAAGCAG ATGTGGCACC TTCAACCTTA
GTGGCTTCAT GGGGCGAGTT TAAGTCGGAT CAATTGCCTA TTTTCAAACT GGCCGAATAT
CACCAAGCGG CGGTTAAGTT ATTAGATGAA GTGCAGTTTG ATCTCTAG
 
Protein sequence
MKWVTCAAVV GLMSVGHSAN ADDKLTVYSY RQAFLVEPIL TRFTEETGIG VNLVFAKDGI 
AERLAREGRL SPADLVLTSD FSRLVELVDK DLTSPVKNAQ LESNIPAQYR DPDGEWYALT
MRVRNLYTAK DRLGPQQITY EELADPKYKG KICTRSGKHP YNIALVASMI AQHGEAEAKT
WLAGVKSNLA RKPQGNDRAQ VKAVKEGLCD IAIGNSYYYG NMMQDPEQKS WAEAVTINFP
NQADRGAHVN VSGMVLTRHA PNKANAIKLM EFLSADVAQK AYADVNMEYP VKADVAPSTL
VASWGEFKSD QLPIFKLAEY HQAAVKLLDE VQFDL