Gene Shew185_3680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3680 
Symbol 
ID5371027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp4376743 
End bp4377318 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content49% 
IMG OID640831938 
ProductyecA family protein 
Protein accessionYP_001367868 
Protein GI153002187 
COG category[S] Function unknown 
COG ID[COG3079] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02292] yecA family protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.140016 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACCC CTCCTTCGTT ACGTATCGAC AGCTTAAAAC TCGCCTTAGA TGCGGCTGAA 
ATCGGCCAAC ATCCGGTAGA AGTTCACGGT GCTTTAGTCG GTTTAATCTG CGGTGGTGTA
GAACAAACTG GCGACACTTG GATCAAGCCT CTATTCGACC TGATGAACGA TGGTCAACCT
TTACCTGCGC AGTTGCACCA ATTAGTGTGT GATTTGTTTA ATGATTCTGT CGCGCGTTTA
GTGGATTTTG AATTTGGTTT CATGCCGCTA TTGCCTGAAG AAGAAGAGCC GCTCAGCCAA
CGTGTTGAAG CCTTGTCCCT TTGGACCCAA AGCTTTTTGA CTGGCATGGC GATTATTCAG
CCGAAACTGA ATCAAGCCTC GGCAGAAGTG CGTGAAGTGA TCAAAGACTT GGCGGAAATT
GCTCAAGTGG AATTTGATGT CGCCGACGAT GAAGAATCTG AAGCTGCTTA CACTGAACTA
CTCGAGTTTG TGCGCATCGC CGCCATTATG TGTTACTCGG AGTTTGGCCC TGAGATCCCG
CTTGGCGAGA CTGACGATAC TGCGGTGGTG CATTAA
 
Protein sequence
MATPPSLRID SLKLALDAAE IGQHPVEVHG ALVGLICGGV EQTGDTWIKP LFDLMNDGQP 
LPAQLHQLVC DLFNDSVARL VDFEFGFMPL LPEEEEPLSQ RVEALSLWTQ SFLTGMAIIQ
PKLNQASAEV REVIKDLAEI AQVEFDVADD EESEAAYTEL LEFVRIAAIM CYSEFGPEIP
LGETDDTAVV H