Gene Shew185_3666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3666 
Symbol 
ID5372056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp4357203 
End bp4358867 
Gene Length1665 bp 
Protein Length554 aa 
Translation table11 
GC content47% 
IMG OID640831924 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001367854 
Protein GI153002173 
COG category[T] Signal transduction mechanisms
[N] Cell motility 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAATT TCAGTTTACG TAACAAATTA CTGCTGTTAT CGCTGTTCCC GTTAATCTTG 
ACCCTGTGCA TACTCATGAC AGTTTCTTAC TACGTCGAAC AAAGCGCCCT TGCCGATGAA
GTCACAACGT TTAGAACTAA GCTTATCGGT GAACGTAAAA CCCAAATAAA AGAAGCCACC
GAAATTGCCG CTGGCATAGT ACAATATCAG TTGTCTTTAA AAGAAAATGG CAATGTAAAT
CAAGCGCTCC GTGATATCCG TTTTGGCAGT TCAGGCTACT TCTTTATCTA CGACTCCCAA
GGCAAAAACC TATTCCATGC CGTCATGCCC AACCTCGAAG GGCAAAATAA AATTGATATG
ACAGATCCCC GCGGCACAAA AATCATTGTT GGTTTACTCG ATGCAGCTAA AAAGGGTGAC
GGTAACTTCT CGTTCTATTT CCAAAAACCT AATACCAATG AGCAAATTGA GAAAATCGGT
TACTCCATGA TGATCCCTGG CACAGATTGG ATGCTAGGCA CGGGCGCTTA TATCGATGAT
ATCGACGCTG TCGTTGAGGA TTATCGTGCA ACTGTCACTG AGCAAATGAT CGAAAAATCC
TATGCCATTC TGTTAATTGC GCTGTTACTC GCCGCGATGA CTGCCGCTGT TATTCTGATC
ACCGCCCAAC GTATGGTCGC GCCAATTAAA AATATGGCAG ACAATTTAAA CGATATCGCC
AAAGGCGAAG GTGATTTAAC TAAACGCCTC ACAGTGAAAG GTGAAGATGA AATAGCGCAA
CTAGGTCAAT CCTTTAACCT GTTTGTCGAT AAGCTCCAAA CCATCATAGG CGATGTGGCA
AACGCGACCG CTAAAGTTAA AAGCGCGGCC AACGCGATTC ACGATCAAAC CAAAGTCATG
TCGAGCCAGC TCATCAGCCA TAACAATGAA ACCGATCAAG TAGTTACTGC TATTACTGAA
ATGTCAGCCA CCGCCAGCGA AGTAGCGCAA AATACCACGC AAGTGGCCGA AGCGACCCAT
GCCGCAACAG GCGATGTGGC CAATGCCCAG CGTTGCGTCG ATGCTTCTTT AGAAGAAATA
TCCGCGCTCA TGGCGCAAAT CAACAATGCG GCTGGCAATA TTCAATCCTT GAGCGAACAG
TCGAAGAAAA TCAATAACGT GCTATCTGTT ATTGGCGGCA TCGCCGAGCA AACTAACCTA
TTAGCATTAA ATGCCGCCAT CGAAGCCGCT CGCGCCGGAG AACAGGGCAG AGGCTTTGCC
GTGGTGGCCG ATGAAGTGCG CAACTTAGCG AGCCGAACTC AATCAAGCAC GCTAGAAATC
AACGAGATGC TATCAGAACT GCACAAGCTT GTGGCGCTAG CGGTGAAAAC GATGGAAGAA
AGTCAGCAAA GCTGCGTACG CTCGGTAGAC TCTTCTCGCG CAATCTCCGA AAGCCTAGGC
TCAGTGACAT CGGCGGTCAC GGCAATCAAC GACATGAGCA CCCAAATTGC AACGGCGGCT
ACGGAACAAA GCTCTGTGAC CGAAGAAATC AACCGCAACG TGTTCGCCAT CCAAGAGATT
GTGAATGAGT TACTTCATTC CAGTGAAGAT GCTGCCAGAG TCAGCCAAAC CGTATCGCAA
GAAGGGATTA ACCTAGGTAA ACTCGTCGGC CAGTTTAAGA TTTAA
 
Protein sequence
MSNFSLRNKL LLLSLFPLIL TLCILMTVSY YVEQSALADE VTTFRTKLIG ERKTQIKEAT 
EIAAGIVQYQ LSLKENGNVN QALRDIRFGS SGYFFIYDSQ GKNLFHAVMP NLEGQNKIDM
TDPRGTKIIV GLLDAAKKGD GNFSFYFQKP NTNEQIEKIG YSMMIPGTDW MLGTGAYIDD
IDAVVEDYRA TVTEQMIEKS YAILLIALLL AAMTAAVILI TAQRMVAPIK NMADNLNDIA
KGEGDLTKRL TVKGEDEIAQ LGQSFNLFVD KLQTIIGDVA NATAKVKSAA NAIHDQTKVM
SSQLISHNNE TDQVVTAITE MSATASEVAQ NTTQVAEATH AATGDVANAQ RCVDASLEEI
SALMAQINNA AGNIQSLSEQ SKKINNVLSV IGGIAEQTNL LALNAAIEAA RAGEQGRGFA
VVADEVRNLA SRTQSSTLEI NEMLSELHKL VALAVKTMEE SQQSCVRSVD SSRAISESLG
SVTSAVTAIN DMSTQIATAA TEQSSVTEEI NRNVFAIQEI VNELLHSSED AARVSQTVSQ
EGINLGKLVG QFKI