| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3630 |
|---|
| Symbol | |
|---|
| ID | 5369988 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 4308860 |
|---|
| End bp | 4311445 |
|---|
| Gene Length | 2586 bp |
|---|
| Protein Length | 861 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640831888 |
|---|
| Product | TonB-dependent receptor |
|---|
| Protein accession | YP_001367818 |
|---|
| Protein GI | 153002137 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000124466 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGAC CTCAGATTCT ACCCAGTGCT TGTGCCATCG CGATTGCTTT AGCATTTGCG
CCAACAGTAG CCCATGCAGC CGATAAAGGC GCAGAAAAAG TTGAACGTAT TGAAGTAACG
GGTTCTCGTA TTAAACGTAC AGATATCGAA GGCCCTTCCC CGATCCAATC GATCAGCAAA
GACGATATTG CTAATATGGG ATTCGATAAC CTACAGCAAT TGCTCGAACG TATGCCTGCG
AACGGTGCTG GTGCGTTTTC TACCCGTGGT AATAGCCAAG ATTCAACTGC CAACGGTGGC
GCGTCTATCA GTTTGCGTGG TTTAGGTCCT GATGCGACCT TAGTGTTGAT TAACGGTCGT
CGGGTTGCTG CGAGTGCTTT TGCTGAAGGT ATTACTAATT CTTTCGTTGA TATCAATAAT
ATCCCTGTTT CAGCGATCGA ACGTATCGAC ATACTCAAGG ACGGTGCATC GGCTATTTAT
GGCTCTGATG CGATTGCCGG TGTGGTCAAC ATTATCCTGA AGAAAGACAT TGAGGGTATT
GAAGTCAATC TCGGCTACGG TGATGCTTCA GGTACGGGTT ACGATGAAAC CACTGCGAAC
ATGGTTTGGG GGATGAAGTC TGATAAGGGC AGTGCCTCCG TTATTCTCGA TTATTTTAAA
AATGGTACCT TAGCTGCGAC TGATTTAGGC CGTTTCGGCA GTGCAGATCA GACTCCTTAT
GGCGGTGAGG ATTTCCGTTC TTCCCGTGGT TTTCCTGGTT ATTTTTATGT TGATGGGGTG
AAAACCATAG ATCCAGCCTG TCCACCTGAT CGGGCGACGC CAAGCGGCAG CTGTGTATTT
GATTATGGGC CATATAACCT TGTTATTCCT TCTGCAGAAC GAGTGGGAGC TATTGGGCAA
TTCGAATATC ATTTCAATGA TGATTTAACT GCTTTCCTTG AATTAGCTGC CCAGCACAAC
ACGTCGGAAG CGGGCGGTGC ACCAACACCT CTTGATGAGG ATGCAGGCTT AACCGTACCA
GGAACTCACC CAAATAACCC TTGGGGGAAA GATATTGAAA TTGGTCGCTT CCGCACCGTT
GATGCGGGTG CGCGTCGTTG GGATATCGAG TCTGATACTC TTCGTTTAGT CGCAGGTTTG
CGTGGCGTAG TTAAAGATTG GGACTGGGAA GCTTCGGTGC AAAAAGGTCG CAGTGAGTCC
ACTCAAACGG GGGATCGCAG CCAAGGTTGG GTCAGAACCG ATTATTTACA ACGTGAAATC
GATGCGGGTC GCTATAATCC TTTCGGTGGC ACCATGAACT CCCAAGATGT CATTGATGAC
ATTACCACTA GTTTAGTGCG CCAAGGTTTG TCAAACATGA CTTCCTATGC AGCTAACATT
TCAGGTCAAG CATTTACCCT TGCTGGTCGC GATATTATGA TGGCGGCTGG AGCTGAATAT
CGTGAAGAAG ATGTCAGCGA TGTGCCCGAT GAACAGTTCC AACGTGGATT GATTTTTGGT
ACTGAAGCAG TCTCTGCGGC GGCATCACGT GAGCAATATG CAGCTTATGT TGAATTATCT
ATTCCGGTAA CGGATAACTT CGAGCTACAA CTTGCTGGTC GTTATGATCA CTATAGTGAT
TTTGGTTCAA CGACTAACCC TAAAGTTGCC TTCCAATGGG GAGTGACTGA CGAGATAACG
GCGCGTGCTT CTTGGTCTAC GGGTTTCCGT GCACCTTCTT TAGCACAAAT AGGTCTTGGT
CCATCGCGTG AAAGTAGTTT CTTCATTGAT ACTTACCGCT GCGCTGCTGA TAGTGTTGAT
TGTGAAGCTT TAGATTACAA CACTGAATTT GAAGGCAACT CGGAGCTGGA TGCTGAGGAA
TCCGAAACTT GGAACGTCGG TATGATTTGG GCGCCAAGCC AGAAATTCGA TGTTGGTTTT
GATATCTATA GCATTACACA AGATAACAAA ATCGATAAAC AGCCGTTAGG CGATATCTAT
ACCGCAAATT GTAATGATCA AAACAGCACT GTATGTGAGC GTTTAGCTCC ACAGGTGGGT
CAGACTTTAG GTCCAATCAG TATCATCCAT TCAAGCTTTA TCAACCTAAG CTCACAAGAT
GTGCAAGGGA TGGATGTTTC GAGTCATTAT GGCGTTGAGT TGGATAGCTA TGGTGATCTG
AAATTTGGAC TTGAGTACAG TTATTTACAT AGTTTCGAAA AAGATGGCCT AGATTACACC
GGTGAGTACA AGTTCCCTCA ACATCGCTGG TTACTTACTA CTAACTGGAC TATGGATAAC
TTTGCCGCCA ACATTAATCT GAGTTATATC GGCGAGTTTG AAGATACACC AGATATCAAT
TTTGATGGCG TCCTCGACTT CGAAAGCAAC AAGTCTCGTA TGGTTGATGC TCAAATCTTA
GTCGACATGT CAGGTACTTA TCGCTTCAAT GAAATGTTCA AACTGACATT GGGTGTAAAC
AACGTATTTG ACGAAGAGCC ACCATTTGCG ATCGGTGACG GTGATACCGA CCTTTACGGC
TATGTTATTT CAGTACATAA CCCTATGGGT CGCTACATCT ACACTAAACT CACTATGAAC
TTCTAA
|
|---|
| Protein sequence | MNRPQILPSA CAIAIALAFA PTVAHAADKG AEKVERIEVT GSRIKRTDIE GPSPIQSISK
DDIANMGFDN LQQLLERMPA NGAGAFSTRG NSQDSTANGG ASISLRGLGP DATLVLINGR
RVAASAFAEG ITNSFVDINN IPVSAIERID ILKDGASAIY GSDAIAGVVN IILKKDIEGI
EVNLGYGDAS GTGYDETTAN MVWGMKSDKG SASVILDYFK NGTLAATDLG RFGSADQTPY
GGEDFRSSRG FPGYFYVDGV KTIDPACPPD RATPSGSCVF DYGPYNLVIP SAERVGAIGQ
FEYHFNDDLT AFLELAAQHN TSEAGGAPTP LDEDAGLTVP GTHPNNPWGK DIEIGRFRTV
DAGARRWDIE SDTLRLVAGL RGVVKDWDWE ASVQKGRSES TQTGDRSQGW VRTDYLQREI
DAGRYNPFGG TMNSQDVIDD ITTSLVRQGL SNMTSYAANI SGQAFTLAGR DIMMAAGAEY
REEDVSDVPD EQFQRGLIFG TEAVSAAASR EQYAAYVELS IPVTDNFELQ LAGRYDHYSD
FGSTTNPKVA FQWGVTDEIT ARASWSTGFR APSLAQIGLG PSRESSFFID TYRCAADSVD
CEALDYNTEF EGNSELDAEE SETWNVGMIW APSQKFDVGF DIYSITQDNK IDKQPLGDIY
TANCNDQNST VCERLAPQVG QTLGPISIIH SSFINLSSQD VQGMDVSSHY GVELDSYGDL
KFGLEYSYLH SFEKDGLDYT GEYKFPQHRW LLTTNWTMDN FAANINLSYI GEFEDTPDIN
FDGVLDFESN KSRMVDAQIL VDMSGTYRFN EMFKLTLGVN NVFDEEPPFA IGDGDTDLYG
YVISVHNPMG RYIYTKLTMN F
|
|---|
| |