Gene Shew185_3619 details

Gene Information

• Locus tag: Shew185_3619
• ID: 5370980
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: -
• Start bp: 4297643
• End bp: 4299505
• Gene Length: 1863 bp
• Protein Length: 620 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640831877
• Product: methyl-accepting chemotaxis sensory transducer
• Protein accession: YP_001367807
• Protein GI: 153002126
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTAATCC GCTCAAAGTT GTTACTCAGC GCAGCTGTGT CTATCTCGGC ATTAGTTGCC 
ATGTTTGGAT TACAACTCCA TTCAAATTCG GTTAAGTCTG AGCTCTCCCA TGCCGTTCAA 
AATGTGCTTG AGTTAGAGCG CGATGTCTTA ATTCTGCGTA AAAACGAAAA GGATTTCTTC 
GCGCGTAAGG ATTTAAAATA TGCCGAGCTA CATAAGCAAA GCCACATGGC AATCGACAGT 
ATTGTCCCAG AATTAGAGAA AGTCTTTAAA GAATACGGTG TGTCCAAGGC ATCGCTTGAA 
AGTTTTGATA GTAATTTAAA TCAGTATCAA GCTGCTTTTT CTGAAGTGGT GCAGCTACAG 
CAGGAAATTG GCTTAACGCC TAAAACAGGT TTGTACGGCA CATTGCGTAC GGCGGTGCAT 
AATGTTGAAA CGCTGCTGAA GCAATACAAT CAGCTCGAAC TCGAAGTGGC TATGCTGCAA 
CTGAGACGTA ACGAAAAAGA TTTTATGCTG CGTCGAGAGC TAAGTTATGT TGAAACCTTC 
GATGCCAACA TTGGCAAGTT TAATGACAAG CTACGTTCAT CGAGCTTAGA TGCCGATACC 
CAAAATAAAA TTGCAGAGCT TATTACTCAG TATCAGAAAG ATTTTAAAAG CTTAACCAAT 
AAAGAGCAGC AACTCGGTTT AACCGAGAAA GATGGCACTA TGGCGCGTCT TGTCGCTGCC 
AACCTACAAA TTGAAAGTAG CGCGAATGAC TTACATAACC TAGCGCTTAA GGCGATTGAT 
GATGCTGAGA GCAGCAGCGT TAATGTCGGT ATTGCGGTGT TTATCTTTAT CGCGTTGCTG 
TTATCTATCA TTACCTATTT GATTATCCGC AGTATTATTG CGCCGGTTGA GCGTATCACG 
CAGATCATTT CTCGCATCGA AGTGAGTAAA GATCTGACCT TGAGATGCGA TGCATCAACG 
CAAGACGAAC TTGGCGAAAT TGCGCAGCAT TTCAATAGTA TGGTGACTAG CTTCCAGCAA 
TTGATTGAAC AAGTGATAGA GTCGGTCGCG ACGATTAACA CTTCCTGTAA GCGCGTATCT 
GAAAATGCCA TGCTTGCCTC TGAAGGCGTG GGCCAACAGC TCAATGAGAC CGATATGGTT 
GCAACGGCGA TAACAGAAAT GGGCGCAACC ATTGACGAAA TTGCTAAAAC AACTGAGTTA 
GCGGCGTTAA AAGCGGGTAA GACGCATGAT AATGCGCAAA GCGGTCAATT AGAAGTTGAG 
CAAACTATCC ATAAAATTCA GTCGCTTGCT GAGCAGCTCA ATAGTTCTGC TGCGGTCATC 
GGTGAATTGG AGCGTGACAG TGAGACTATT GGTAGTGTGT TAGATGTGAT CCGCGGCATT 
GCTGAGCAAA CTAACCTTTT AGCCTTGAAT GCCGCGATTG AAGCGGCACG TGCAGGTGAA 
CAGGGCCGTG GTTTTGCAGT GGTTGCCGAT GAAGTGCGTA ACTTAGCGAT GCGGACACAA 
TCGTCAACAC AAGAGATTGC GAACATTATT CAGACCTTAC AGACGCGTAC TCGCTCGATT 
GTGCAATTGA TGGAATCGAG TCAAAAACAA GGTGTTGAGA GTGCGGAGCA AGCGGCGAGT 
GCCGGTGCGT TACTCAAGCT TATTAATACT GATGTGCGTA ACATCATGGA CATGAGTACT 
CAAATTGCCG CGGCGATTGA AGAGCAAAGC ATGGTGGCGG CAGAAGTGAA TAAGAACGTG 
GTGGTGATCC GCGATATCGC CGAAGAATCC TCCCATGCGG CAGATGCCAA TGCGTCGGCA 
TCGGATGAGC TGAAAGCGCA GGCTGAATTC TTATTCCGTG CGGTCAGTAA TTTTAAAATC 
TAA 

 

Protein sequence

MLIRSKLLLS AAVSISALVA MFGLQLHSNS VKSELSHAVQ NVLELERDVL ILRKNEKDFF 
ARKDLKYAEL HKQSHMAIDS IVPELEKVFK EYGVSKASLE SFDSNLNQYQ AAFSEVVQLQ 
QEIGLTPKTG LYGTLRTAVH NVETLLKQYN QLELEVAMLQ LRRNEKDFML RRELSYVETF 
DANIGKFNDK LRSSSLDADT QNKIAELITQ YQKDFKSLTN KEQQLGLTEK DGTMARLVAA 
NLQIESSAND LHNLALKAID DAESSSVNVG IAVFIFIALL LSIITYLIIR SIIAPVERIT 
QIISRIEVSK DLTLRCDAST QDELGEIAQH FNSMVTSFQQ LIEQVIESVA TINTSCKRVS 
ENAMLASEGV GQQLNETDMV ATAITEMGAT IDEIAKTTEL AALKAGKTHD NAQSGQLEVE 
QTIHKIQSLA EQLNSSAAVI GELERDSETI GSVLDVIRGI AEQTNLLALN AAIEAARAGE 
QGRGFAVVAD EVRNLAMRTQ SSTQEIANII QTLQTRTRSI VQLMESSQKQ GVESAEQAAS 
AGALLKLINT DVRNIMDMST QIAAAIEEQS MVAAEVNKNV VVIRDIAEES SHAADANASA 
SDELKAQAEF LFRAVSNFKI