Gene Shew185_3614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3614 
SymbolprfA 
ID5371128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp4292282 
End bp4293373 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content50% 
IMG OID640831872 
Productpeptide chain release factor 1 
Protein accessionYP_001367802 
Protein GI153002121 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0216] Protein chain release factor A 
TIGRFAM ID[TIGR00019] peptide chain release factor 1 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value8.15596e-06 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGAAT CCGTTATCCG CAAGCTGGAA GGCTTGCTCG AGCGCAATGA AGAAGTCATG 
GCTTTGCTGG GTGATGCTAG CGTCATTTCG GATCAAGACA GGTTTCGCGC GTTATCGAAA
GAATATGCCC AGTTAGAAGA CGTTGTTGCT GGCTTTAAAG CCTATCAGCA AGCGCAGGCT
GATCTTGATT CTGCCAAAGA AATGCTGGAA GAAGACGATG CAGAAATGCG CGAAATGGCG
CAGGAAGAGA TGAAAGCCGC TAAGGCCAAA CTCGAGCATC TTGAAGATGA ACTGCAAATT
CTTTTACTGC CAAAAGATCC CGACGACGAT AAAAACGCCT TCGTTGAGAT CCGCGCAGGT
GCAGGCGGTG ATGAAGCCGC GATTTTCGCG GGCGATTTGT TCCGCATGTA CAGCCGTTAT
GCCGAAGCAA ATCGCTGGCA GATCGAAATT ATGAGCTGTA ACGAAGGCGA ACATGGTGGC
TTTAAAGAAG TGATCATGAA GGTGAGCGGT GAAGGCGTAT ACGGCAAACT TAAGTTTGAA
TCCGGCGGTC ACCGCGTACA ACGTGTGCCA GAAACCGAAT CCCAAGGTCG TGTGCATACT
TCTGCGGTGA CTGTGGTTGT ACTGCATGAA GTGCCTGAAG CGGAAGCGAT TTCAATCAAT
CCTGCCGATC TGAAAGTTGA TACTTTCCGT TCATCGGGCG CGGGTGGTCA GCACGTTAAC
AAAACTGATT CTGCCATTCG TATTACCCAC ATTCCAACAG GGATAGTGGT GGAATGCCAA
GATCAACGCT CGCAACATAA GAACCGTGCC CAAGCCATGA GTGTTCTGGC CGCACGTATT
CAAGCTGTTG AAGACGAAAA ACGCCGTAGC GCCGAAGAAT CGACCCGTCG TAGTCTGGTT
GCCAGTGGTG ATCGCTCCGA ACGTGTACGT ACTTACAACT TCCCGCAAGG CCGAGTGAGC
GAACACCGCA TCAACTTGAC TTTATATCGC TTGAACGAAG TGATGGAAGG CGATCTCGAT
GCCATTTTAT TGCCTCTGAT GCAAGAGCAT CAAGCCGATC AGTTAGCCGC ACTGGCTGAC
GAGCAGGGGT AG
 
Protein sequence
MKESVIRKLE GLLERNEEVM ALLGDASVIS DQDRFRALSK EYAQLEDVVA GFKAYQQAQA 
DLDSAKEMLE EDDAEMREMA QEEMKAAKAK LEHLEDELQI LLLPKDPDDD KNAFVEIRAG
AGGDEAAIFA GDLFRMYSRY AEANRWQIEI MSCNEGEHGG FKEVIMKVSG EGVYGKLKFE
SGGHRVQRVP ETESQGRVHT SAVTVVVLHE VPEAEAISIN PADLKVDTFR SSGAGGQHVN
KTDSAIRITH IPTGIVVECQ DQRSQHKNRA QAMSVLAARI QAVEDEKRRS AEESTRRSLV
ASGDRSERVR TYNFPQGRVS EHRINLTLYR LNEVMEGDLD AILLPLMQEH QADQLAALAD
EQG