Gene Shew185_3590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3590 
Symbol 
ID5372862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand- 
Start bp4269929 
End bp4270459 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content46% 
IMG OID640831848 
Producthypoxanthine phosphoribosyltransferase 
Protein accessionYP_001367778 
Protein GI153002097 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0634] Hypoxanthine-guanine phosphoribosyltransferase 
TIGRFAM ID[TIGR01203] hypoxanthine phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0169693 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACACA CCACCGAAGT GATGATCTCT GCAGAAGAGA TAAGCCAGAA ATTGGATCAA 
ATGGCCGAGC TAATCAATGC CCATTATGCC CACAGCGAAC GTCTGCTGAT GGTAGGCTTG 
TTAAAAGGCT CAGTGGTCTT TATGGCAGAC CTGTGTCGCC GAATTAAAGG CCATGTTGAA 
ATCGATTTTA TGTCGGTTTC CAGTTATGGT AATGCTATGA CCAGCTCACG GGATGTGAAA 
GTGCTGAAAG ATGTGCAATC AGATATCGCC GGTCGCGATG TATTGATTGT GGAAGACTTG 
ATTGACTCAG GTAACACCTT AAGCAAAGTG CGCGAGATGC TGTTACTGCG CGAGCCTAAG 
AGCCTTGCAC TGTGCACCCT GCTGGATAAA CCTGAACGTC GTGAAGTGGA TGTGAAGGTC 
GATTTTATCG GTTTCACTAT CCCTGATGAG TTTATCGTGG GTTATGGTAT TGATTATGCA 
GAGCAATATC GCAATCTACC TTACATCGCG AAAGTCGTGC CACTCGATTA A
 
Protein sequence
MKHTTEVMIS AEEISQKLDQ MAELINAHYA HSERLLMVGL LKGSVVFMAD LCRRIKGHVE 
IDFMSVSSYG NAMTSSRDVK VLKDVQSDIA GRDVLIVEDL IDSGNTLSKV REMLLLREPK 
SLALCTLLDK PERREVDVKV DFIGFTIPDE FIVGYGIDYA EQYRNLPYIA KVVPLD