Gene Shew185_3516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3516 
Symbol 
ID5373127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp4181817 
End bp4182584 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content46% 
IMG OID640831776 
Productintegrase catalytic region 
Protein accessionYP_001367706 
Protein GI153002025 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAGCC GAAGAGCTGA GTTATCGGTC ATCAAAGATT GGGTTCAATA TTGGCGTAAC 
TATATGCCAC GATTGGGGAC GCGTAAGCTC TACAGCTTGA TACAACCTAA GCTGGTTGAA
CATGATATCA AACTCGGGCG AGACGGGTTC TTTACCTATT TGAGAAATGA GGGCTTGCTA
GTTAAGCCCA AGAGAAGCTT CACAAAAACG ACATTCAGCA AGCATTGGAT GAAGAAACAT
CCCAACCTGC TGAAGGAAGA GGGACTACAC GATGCCGAGC ATGTACTGGT CAGCGATATT
ACCTATCTCG AAACAGACCA AGGCGTGCAC TATTTATCAC TAGTGACCGA TGCCGCGTCA
CGTAAGATAG TCGGTCATCA CTTGAGTACG GACATGAAAG CAGAAAGCGT AGTAAAAGCA
CTGAAGATGG CAGTCAAAGA TAAGCGCTAT AGCGCGAATG CAGTCCATCA CTCAGACCGA
GGTTCGCAGT ACTGCTCAGC CGTTTATCAA GATGAACTGC AGGCCAACCA TATTCAGCCG
TCGATGACAG ACGGTTATGA TTGCTATCAA AATGCGTTAG CAGAACGAGT AAATGGGATC
CTGAAGCAAG AGTTTTTACT CTACCGATGT AAAACGCTGG AAGAGCTGAA GAGACTTGTT
AGAGAATCGA TAGCGATATA CAACGAAATG AGACCGCATC TGAGTTTGGA TATGGAAACA
CCCAATCAGG TGCATAATAG AAAAGGCCAG CTACTGGAGC TGGCCTAG
 
Protein sequence
MASRRAELSV IKDWVQYWRN YMPRLGTRKL YSLIQPKLVE HDIKLGRDGF FTYLRNEGLL 
VKPKRSFTKT TFSKHWMKKH PNLLKEEGLH DAEHVLVSDI TYLETDQGVH YLSLVTDAAS
RKIVGHHLST DMKAESVVKA LKMAVKDKRY SANAVHHSDR GSQYCSAVYQ DELQANHIQP
SMTDGYDCYQ NALAERVNGI LKQEFLLYRC KTLEELKRLV RESIAIYNEM RPHLSLDMET
PNQVHNRKGQ LLELA