Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3509 |
Symbol | |
ID | 5371775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 4173447 |
End bp | 4176161 |
Gene Length | 2715 bp |
Protein Length | 904 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640831769 |
Product | TonB-dependent receptor |
Protein accession | YP_001367699 |
Protein GI | 153002018 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4206] Outer membrane cobalamin receptor protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCGCT CCGCAGTAAT GACTTCAATG GCAATATCCC TAGCCAGCAT GGCCACTTTT TCAGGGTTAG CAGCCGAAGC CGAAACTGAA GCAATGTTGC CAGCATCTGC AATTAAACCT CAAGTATCGA CTCCCACGGC TATGGAAAGG ATTGCCATTA CAGGGAGCCG AATTCAAAGG GAAGAGATGG CTTCCACCGC GCCTATGACC GTTTTTACCG CGCAAGATAT CGAGAAAACC GGTGCCACTT CAGTTGAAGT ATTGCTGCAA AGAATGACAG CCTCTGCGGG GTTTGCGGGT AATCAAACGA ATGCCTATTG GACTGAAGGT GGCTATGGTT CAACCCAAGT CAACCTGCGT GGATTAGGGG TGAATCGCAC ACTCGTACTG CTCAATGGTC GACGTATGCT GAACAGTGGC ACTGGGGCAA ACTCCTCCGT GGATCTTAAT ACCATTCCCA TTAGCGTGGT TGAACGAATC GAGGTCTTAA AAGATGGCGC ATCCGCCATT TATGGTGCCG ACGCGGTTGC AGGCGTGGTC AATATCATCA CTCGGCAGCA AATCGAAGGG GTTGAGTTTC AAGCACGAAC GGGCATAACC GAGCAAAATG ATGGTGGACA GTACAAGCTC GACCTTGCCC TCGGTCATGT CGGTGAGCGT GGCAGTGCAT ATGTGGCGAT GAGTTACGAT AAAACCCAAG CCGTCGATAT GCTGAGTCGC GCACCTTGTC CGCTTGAAGA AGTTAATGGT GAGCTAGTGT GTGGCGGTAG CTCGGCGCTG CCGGGAGGCA GAGGCCATTT CATTGATACC AATGGTAATC CAATCGGCGA TCCGTTAATG CTGTTGCCAA CAGGAAGTGC CCCTTACACA AGCAGCCATA AAGACAATAC TTATCAGTAT TTTAATGCGG TCCAACCTAA CGAGCGAGTC AATCTGTTTG CCTACGGTGA ATATGACTTA ACGGCAAGCA GCCAAGTGTT TGCTGAGGCC ATGTACACTC ACCGTAGCTC ACAATTACCC GCTACCCCGC AATCCGTGTC AGGAATAGTC ATTCCTGCTT GGCATGAGTC AAATCCGACC GATTCAGACT TTCTGCTCCA GAGTCGCAGA CTGGCTGAAG CGTCCCGACA ATTTAATATT CAAGCAGATA CTTGGCGCTT AGTGACAGGA TTAAGAGGGG ATTTAGACAA CGGTTGGCAA TGGGATGCTG CGGTTAACTT CGGCAGTAAC CGTGGCTCCT ATGAAGTGAC CAATGTCATT AATAATACTC GTCTTGCCGA TGCGACAGAC TATAGCAATT GTAATATTGA TCCTAATGTC CCTTGCGCAA ACTTTTGGGG AGCTGGCTCA CTCACACCTG AAATGCTGGA CTATTTTCTG TTTAACATGC GTGATAGCGG CGGTAATGAG CAGTTTAGTC TCACAACGAA TATCACAGGC GATCTATGGC AGTTACCCGC GGGCATGATG AGTTTTGCTG CAGGACTAGA GCACAGAAAC GAGAAAGGAT GGAATGACCC CGACCCACTT AAAATCAGTG GTGAAGCAAA CACTGCCCAG CAAGATCCGA TTGATGGTCG TTATACTGCC GACGAAATCT ATCTTGAAAC CTTATTACCT ATTTTAAGCG GCCTGCCCTT TGCCAAGTCG GTCGAATTAA CTGCGGCGTT GCGATATTCC TATTTTGATA CCTTCGGTGG TGATACCAAT TATAAAATGG GGCTACTGTG GGTCATCAAT GACGCAGTGA CGCTGCGGGC CACACAATCC ACGGCATTCA GAGTACCGAA TATTCCTGAG TTGTTTGGCG GCATAGATCA AGGCTCCATG AATACCACAG ATCCTTGTAG CGAGTGGGTT AAGCTCGACC CTAGCTCGAA TCGATACGCT AATTGTATGG CATCAAACGT GCCAACGAAT TATAAGCAAG AAGGCACAAT ATTAACCGAC CGTGGTGGCA ATGCTGAACT TGAACCAGAA GAAGCCAATA CCTTTACTGC GGGTATTGTT TGGGATCTGG AATTTATTGA AGGGCTCAAT ATCACGCTCG ATTACTACAA GATAGAGATT AATAACGCCA TTAACTCAGT CAATGGTTCG AGCAAATTAG CCGCCTGTTA CGACAGCAAA GGGATGACGC ATCCTTTCTG TAGCGACGAG CACTTTGTGC GAGACGCAAT GACAGGCAAC ATCACCTATT TACAAACACA ACTGGGCAAC GCCGCCAACG AAGTGGTTTC AGGTGTTGAT ATGGCGATGT TTTACCAGAA AGAGATGGGC AACGTTGTGA CTAATACGAC TTGGGAGCTG AGCTATTTAG ATCAATACGA TCTGCAAACC TACGCCGGTG CCCCCGTTGA ATCACGAGCT GGCACCATTG GTTATGATGG TAGCTACACC AAATGGCGCT CAAACCTCTA TTTTGATGTC ACTAATGACA ATTGGCGCTT TAGCTACAAC ATTCAATATA TCGGCGCGGC GGATGATCAA TATGCCAATG CCGGAGAGAT AGGTGACTCA GTTGATGCGC TCACTTACCA TAACGCACAG GTTCATTATC AAATGGACAG CAATATTGCG TTCACAGCAG GTATCGATAA TCTGTTCGAC AAGCAAGCGC CATATCATCA AAGCTATACC GACGGTAATA CCAACACTAT GACGTACGAC CTAATGGGAC GTCGTTACTA TATCGGGATG AAATGGGCTC TGTAG
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Protein sequence | MTRSAVMTSM AISLASMATF SGLAAEAETE AMLPASAIKP QVSTPTAMER IAITGSRIQR EEMASTAPMT VFTAQDIEKT GATSVEVLLQ RMTASAGFAG NQTNAYWTEG GYGSTQVNLR GLGVNRTLVL LNGRRMLNSG TGANSSVDLN TIPISVVERI EVLKDGASAI YGADAVAGVV NIITRQQIEG VEFQARTGIT EQNDGGQYKL DLALGHVGER GSAYVAMSYD KTQAVDMLSR APCPLEEVNG ELVCGGSSAL PGGRGHFIDT NGNPIGDPLM LLPTGSAPYT SSHKDNTYQY FNAVQPNERV NLFAYGEYDL TASSQVFAEA MYTHRSSQLP ATPQSVSGIV IPAWHESNPT DSDFLLQSRR LAEASRQFNI QADTWRLVTG LRGDLDNGWQ WDAAVNFGSN RGSYEVTNVI NNTRLADATD YSNCNIDPNV PCANFWGAGS LTPEMLDYFL FNMRDSGGNE QFSLTTNITG DLWQLPAGMM SFAAGLEHRN EKGWNDPDPL KISGEANTAQ QDPIDGRYTA DEIYLETLLP ILSGLPFAKS VELTAALRYS YFDTFGGDTN YKMGLLWVIN DAVTLRATQS TAFRVPNIPE LFGGIDQGSM NTTDPCSEWV KLDPSSNRYA NCMASNVPTN YKQEGTILTD RGGNAELEPE EANTFTAGIV WDLEFIEGLN ITLDYYKIEI NNAINSVNGS SKLAACYDSK GMTHPFCSDE HFVRDAMTGN ITYLQTQLGN AANEVVSGVD MAMFYQKEMG NVVTNTTWEL SYLDQYDLQT YAGAPVESRA GTIGYDGSYT KWRSNLYFDV TNDNWRFSYN IQYIGAADDQ YANAGEIGDS VDALTYHNAQ VHYQMDSNIA FTAGIDNLFD KQAPYHQSYT DGNTNTMTYD LMGRRYYIGM KWAL
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