| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3493 |
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| Symbol | |
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| ID | 5373759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 4153293 |
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| End bp | 4157570 |
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| Gene Length | 4278 bp |
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| Protein Length | 1425 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640831753 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_001367683 |
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| Protein GI | 153002002 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases
[COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAGAAC TTCGAATTGA TGACCAAGTG TTGTCGGTTA ACCCGACCGA TAACCTACTG
CAAGTGGCGC ATGCCGCTGG CATAGCAATA CCCAGCTTAT GTGATCCCAG CGCGGCCTCG
CAGCAATTAG GCACTCATGC ACACACTCAC GCACAAGCAG ACAAGCAAGC CTGCAATTTG
TGTGTCGTCC AAATTGAAAA TACCGATGCC AGTTTGCGCT GCGTACGCGC CTGCGAAACG
CTGGTCGCAG CGGGCATGCG GGTGATAACT CAGTCCGAAT GGTTAAGTCA ACAGCGCAAA
CAAGCACTGA CAGCGATCTT GAGCGATCAC TTCGCCGATT GTGAAGCCCC GTGCCAACAA
GCATGCCCTG CGGGCGTCGA TGTGCAGAGT TACCTGTATC ACATCGCCCA AGGCAACCAT
ACCGAAGCCG TTAAAGTCAT TAAACAAACC TTGCCGCTGC CACTGTCCAT TGGCCGAGTT
TGCCCCGCTT TTTGTGAGGC ACAATGTCGC CGCGGACTGG TCGATGAGCC CATCGCCATT
CGTCAATTAA AACGCCACGC CGCTGATCTC GATCTCGCCG ATGGCGAAAA GGGCGGCACG
AGTTATGTGC CGCCACGCCA AGCCGACACG GGCAAAAAAG TCGCGATTAT TGGGGCGGGC
CCAGCAGGAT TAAGTGCAGG ATATTACTTA TCAAACCAAG GCCATAGCGT TGAGATATTC
GAAGCTATGC CACAGGCTGG TGGCTGGCTG CGCTATGGCA TTCCTGAATA TCGTTTACCT
AAGGCGATAC TCGATAAAGA AATCGAACTC TTGTGCCATA ACGGCTTAAC CATACACACA
GAAATGCGCC TCGGCCATGA GGTGCATTTA AATCAATTAG TTGAAGATTT CGATGCCGTC
TGTCTTGCGA TCGGCGCCCA AAAAGCCGTG CCTATGGATT ATCCCGGCAG CACACTCAAA
GGTTGTTATT TAGGCGTTGA TTACTTGAAA GATCATTGCC TCGACCAGAC ACTCGTACTG
GGCAAAAAAG TCGCCGTCAT TGGTGGCGGC AATACGGCTA TCGATTGCGC CCGCACTGCG
GTGCGTGAAG GCTGCGATGT CACCTTAATT TACCGTCGCA CCCGCGCCGA AATGCCCGCC
GAAGCTTACG AAGTACACGA GGCCGAAGTC GAAGGGGTGA AATTTCATTT CTTAACCAAC
CCAATTGAAA ACCATAGCGA TGCGCAAGGC AGAGTCCACG CCGTCACCTT TGCCAAAATG
GCGCTCGGCG AAGCAGATGC CTCTGGCAGA CGCGCTCCCG TTGATACCGG TGAAACCTTT
ACCCAGGATT TTGATACTGT GATAGCCGCA GTATCGCAAA CTCCCGACCT GAGTTTTATG
CAAGATCCCG CCAGCCCTTT AAGCCAAGGC ACACTTGCCC TCAGCCGCTG GAATACCTTC
ATTGGCTGCG AGCACACTAT GTCATCCGGG GTTGAAAAGC TCTTTGTGGT GGGCGATGCG
CGCCGCGGTC CTGCCACCGC AGTTGCCGCC ATAGGTGATG GCCATAAAGC CGCCATCGCC
ATAGATAAAT TACTCAAACA AGGCCTAAGT TGCGAGCTGC ATGCCAATGC ATTTAATTCC
GCTAAAGCCA TCAGCAAAGC GGTAACACAA GACTTGCCCG CAACCGATCT TTATCCCGCC
GTACCGCGTA AAGCCCGTTT AACCATGCCC GAACTCAGTG CGGTGCAGCG TTTACTCAAT
TACGGCGAAG TCGAGCTAGG CTTTGCTCCC GATGCCGCGA TGCAAGAAGC GGCGCGCTGC
CTTGAATGCG CCTGCCAAGC CAATACGGAT TGTAAGTTAA GGGACTATGC GACCGACTAC
CATGTCGAGC CTAAGTCACT CAACACTCAA AGCGCGCGTA AGTTTTCGGT CGATAAATCG
AGTCCTTTCA TTCAATTTGA TGCGAATCGC TGTATTAGCT GCGGTAAGTG CGTTGATGTG
TGCCAGCTAC AAAGTGGCCA TTGTGCGATT CAATTTGCCC ATGATTCCTA TCAAGCACTG
CCGCAAGACC TAAGCGAAAC CATCGAACGC CGCGCACCGA GAGTCGGCTT TAGCGCCAGC
ATGGCCGACA GTAAATGCGT GCAATGCGGC AACTGTGTGC AGGTTTGCCC AACAGGCGCA
CTCGTCGATG CGCGGGATAA ACGCCAAGGC GATGAAACAC CACCCAAAAC CGCCTCAACG
ATTTGTACCT ATTGCGGTGT AGGCTGTCGG CTTGACCTTA AAATCGATAC CAGCACTAAT
CAGATCCGTC ATATCGAGGG CAACAAAGAG TCTGTGGTTA ACCAAGGCAT GCTCTGCGTC
AAAGGGCGAT TTGGTTTCGA TTTTATTCAC AGTGAAAAAC GCCTCACCAC GCCACTCATT
CGTAAAAATG GCCAGCTCAC GCCAAGTAGT TGGCCTGAAG CCATCACCTA TGTGGCCGAA
CATTTACAGC AAATAAAACA GCAATATGGC AGTAATGCAC TGGCAAGCTT GGCCTCGGCA
AAAGCCACCA ATGAAGAAAA CTTCCTGCTG CAAAAATTTG TCAGAAGCAT ACTCGGCACC
AATAACATCG ACCATTGCGC CCGTCTGTGT CATTCATCTA CGGTAACAGG CCTGCAGCAA
AGTATCGGCA GTGGTGCCAT GACCAATGAC ATTCCGAGCA TTCAAGCATC GGATGTGATT
TTTATCATAG GCTCAGACAC CAGCAGTGCT CACCCGATCA TCGCCTCGAA AATTAAGCAA
GCCGTGGCTT TGCATGGTGC AAAATTAATA GTGGCCGACC CTAAACGTGT CGCCATTGCC
GACAGTGCAC AGCTTTATGT CGCCCACAGA CCCGGCACTG ACGTCATGTT ACTCAATGCG
ATTATGGCGG AAATCATCCG CAACGACTGG CAGGATAAAA GCTACATTAC CGCACGCACC
GAAGGAGTCG ATGCCCTCTA CGCTGAACTC GCAAAAGCAG ATTACAGTCT AAAAAACGCG
GCCTTGATAA CTGGCGTTAC AGCCGAAGAT ATCGCCTGTA TCGCCCGCAC CATAGGCACG
GCTGAGAAAA CCGCAATCTA CTATGCAATG GGGATCACTC AGCACACGAC GGGACACGAC
AATGTCACCG CCATATCCAA TCTACAACTT CTATGCGGTA ATATTGGGGT TGAAGGTGCG
GGGATTAACC CACTGCGGGG GCAAAGTAAT GTGCAAGGTG CCTGCGACAT GGGCGCACTG
CCTAACTTCT TCAGTGGCTA CCAAAAAGTC ACCGACATTC ATGCCAGAAT GCGTTTCGAG
GCACACTGGC AAACGCCGTT ATCGGGGGAG ATTGGCGTAA CCGCAACCCA CATGATGCAT
GATATTTCCA AAGGAAAAAT CAAAGCTTTG TATGTGATGG GCGAAAACCC CGTATTGAGC
GATCCTGACC AAGCCCATGT GCTTAGGGCG CTTAATGCAA TCGACTTTTT AGTGGTGCAG
GATATCTTCC TCACCGAAAC CGCCGAGCTT GCCGATGTGG TTCTGCCCGC CGCCGCCTTT
GTCGAAAAAC GTGGTCATTT CACCAATACT GAACGACGAG TGCAGCGACT CGAACAAGCT
CTGTTACCGC CAGGTGAAGC CCTGCCCGAT TGGCAAATTG TCCAAGCTAT TGCCAATGCG
ATGGGTGCCG CTTGGGATTA CCCCAATGAA GAAGCGATTT GGCAGGAGAT CAATGAGCTA
ACACCACAAT ATCGCGGCAT TACTTGGCAA CGATTAAGCA CTGGAGTTGA CGGTAAAATC
CCCCAAGGTA TTCAATGGCC ATGTCCAGAC GAAACCCATC CTGGTACTCC CATTATGCAC
CAAAATCAAT TCACCCGCGG CTTAGGTAAG TTCACGCCAG TGAGTTATCG CTTACCCGCA
GAAATGCCCT GCAGTGAGTA CCCGCTCACC CTCTCGACCG GACGTTTACT GGAACAGTTC
CACACAGGCA CCTTAACCCG TAAAACAGCG GGGCTCGACT TACTCGGCTC GCCTAAAGTG
ATAATTTCAG TCTATGACGC TGAGCAACTC GGGATAGGCA ATGGCGATAA AATCAAACTC
ACTACCCGTC GCGGCGAAAT TGAAATCGAC GCCTTTGTGA CGAAAAGAGC GCAAGCTGGC
GTGCTATTCC TGCCCTTCCA TTTTGTTGAA GCGGCGGCGA ATAAACTCAC CATCAATGCG
CTCGATCCTG TCGCTTTTAT CCCAGAATAT AAGGTCTGCT CTGTGAGGGT AGAACGGGTT
GCCGAGAAGA TTGATTAA
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| Protein sequence | MIELRIDDQV LSVNPTDNLL QVAHAAGIAI PSLCDPSAAS QQLGTHAHTH AQADKQACNL
CVVQIENTDA SLRCVRACET LVAAGMRVIT QSEWLSQQRK QALTAILSDH FADCEAPCQQ
ACPAGVDVQS YLYHIAQGNH TEAVKVIKQT LPLPLSIGRV CPAFCEAQCR RGLVDEPIAI
RQLKRHAADL DLADGEKGGT SYVPPRQADT GKKVAIIGAG PAGLSAGYYL SNQGHSVEIF
EAMPQAGGWL RYGIPEYRLP KAILDKEIEL LCHNGLTIHT EMRLGHEVHL NQLVEDFDAV
CLAIGAQKAV PMDYPGSTLK GCYLGVDYLK DHCLDQTLVL GKKVAVIGGG NTAIDCARTA
VREGCDVTLI YRRTRAEMPA EAYEVHEAEV EGVKFHFLTN PIENHSDAQG RVHAVTFAKM
ALGEADASGR RAPVDTGETF TQDFDTVIAA VSQTPDLSFM QDPASPLSQG TLALSRWNTF
IGCEHTMSSG VEKLFVVGDA RRGPATAVAA IGDGHKAAIA IDKLLKQGLS CELHANAFNS
AKAISKAVTQ DLPATDLYPA VPRKARLTMP ELSAVQRLLN YGEVELGFAP DAAMQEAARC
LECACQANTD CKLRDYATDY HVEPKSLNTQ SARKFSVDKS SPFIQFDANR CISCGKCVDV
CQLQSGHCAI QFAHDSYQAL PQDLSETIER RAPRVGFSAS MADSKCVQCG NCVQVCPTGA
LVDARDKRQG DETPPKTAST ICTYCGVGCR LDLKIDTSTN QIRHIEGNKE SVVNQGMLCV
KGRFGFDFIH SEKRLTTPLI RKNGQLTPSS WPEAITYVAE HLQQIKQQYG SNALASLASA
KATNEENFLL QKFVRSILGT NNIDHCARLC HSSTVTGLQQ SIGSGAMTND IPSIQASDVI
FIIGSDTSSA HPIIASKIKQ AVALHGAKLI VADPKRVAIA DSAQLYVAHR PGTDVMLLNA
IMAEIIRNDW QDKSYITART EGVDALYAEL AKADYSLKNA ALITGVTAED IACIARTIGT
AEKTAIYYAM GITQHTTGHD NVTAISNLQL LCGNIGVEGA GINPLRGQSN VQGACDMGAL
PNFFSGYQKV TDIHARMRFE AHWQTPLSGE IGVTATHMMH DISKGKIKAL YVMGENPVLS
DPDQAHVLRA LNAIDFLVVQ DIFLTETAEL ADVVLPAAAF VEKRGHFTNT ERRVQRLEQA
LLPPGEALPD WQIVQAIANA MGAAWDYPNE EAIWQEINEL TPQYRGITWQ RLSTGVDGKI
PQGIQWPCPD ETHPGTPIMH QNQFTRGLGK FTPVSYRLPA EMPCSEYPLT LSTGRLLEQF
HTGTLTRKTA GLDLLGSPKV IISVYDAEQL GIGNGDKIKL TTRRGEIEID AFVTKRAQAG
VLFLPFHFVE AAANKLTINA LDPVAFIPEY KVCSVRVERV AEKID
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