| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3441 |
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| Symbol | |
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| ID | 5373809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 4084939 |
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| End bp | 4086141 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640831701 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_001367631 |
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| Protein GI | 153001950 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.837811 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGATTGC GGAGCTCTGT CCTGAGAGCA TGTTCACGTC TGTTAGAACC ATGGGCTCGT
TTGATGTCAG GGAGAGTATT AAAAATGCGT AAGTTTGGGA GTGTACTCAT CTTAATGCTG
CTGATGGGGC TGAGCGGTTG TAATCCCGCA GCCAGTGATG CGCAAAGCGT AGCCGTTTCC
CATGCCGCAA CGGATGACCC CCAAGCTATC CCCACTATTG AATGGCGCCT TGCGACCTCT
TGGCCTAAAA ACTTCCCCGG TTTAGGTATG GCTCCCGAAC GCTTTGCCCA TTTAGTCAAT
GAAATGTCTA ACGGTCGGTT AAAGATCCAG GTTTATGGCG CGGGGGAGTT AATGCCAGCG
TTTGCCGTAT TTGATGGTGT GAGTCAGGGT AAAATTCAAA TGGCCCATGC CGCTTCTTAC
TACTGGAAAG GCAAGGCACC CGCGGCGCAG TTTTTTTCAT CGATTCCCTT TGGTATGACG
GCGCAGGAAA TGAACGGCTG GCTACACTAC GGCGGTGGCA TGGCGTTGTG GGATGAAGTG
TATCGCCCCT TTGGCATCAT TCCCCTCGCG GGTGGCAATA CGGGCATGCA AATGGGCGGC
TGGTTCAATA AACCGATTAA TACGATTGCC GATTTTAAGG GATTGAAGAT CCGTATGCCG
GGCTTGGGCG GCGAAGTATT AAAGCGTGTC GGTGCTATTC CTGTGAATAT GGCGGGGCGT
GAACTCTATG GTGCATTGCA AACAGGCTCG ATTGATGCGG CTGAGTGGGT AGGGCCATTG
AACGACCTTG CTTTCGGTTT ACATAAAGTG GCGAAGTACT ACTATTACCC TGGTTGGCAT
GAGCCGGGTT CTAATATGGA ATTCTTGATT AATAAAGCCG CCTTCGAGAG TTTACCTCAA
GATTTACAAG CCATAGTTAA AGTCGCGGCG AGAGCCATTA ATCAAGATAT GCTGGATGAA
TACACGACCC ATAATGTGGC CGCCCTTGAA ACCTTAGTGA ATGATGAAGG AGTGGTGCTT
AAGGCGTTTC CACCGAAAGT GTTGTTGGAA CTTGAGAAAA TATCTAAACA AGTGATTGAA
GAGCAAGCTA ATCAAGATCC CTTAATGCGC AAAGTGTACG CCGCCTATCA CGCCTACGAG
CAAGGTGTGC GCCAGTATCA TAAAATATCT GAGGATGCTT ACAGCCAACA GCGCCAACAC
TAA
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| Protein sequence | MRLRSSVLRA CSRLLEPWAR LMSGRVLKMR KFGSVLILML LMGLSGCNPA ASDAQSVAVS
HAATDDPQAI PTIEWRLATS WPKNFPGLGM APERFAHLVN EMSNGRLKIQ VYGAGELMPA
FAVFDGVSQG KIQMAHAASY YWKGKAPAAQ FFSSIPFGMT AQEMNGWLHY GGGMALWDEV
YRPFGIIPLA GGNTGMQMGG WFNKPINTIA DFKGLKIRMP GLGGEVLKRV GAIPVNMAGR
ELYGALQTGS IDAAEWVGPL NDLAFGLHKV AKYYYYPGWH EPGSNMEFLI NKAAFESLPQ
DLQAIVKVAA RAINQDMLDE YTTHNVAALE TLVNDEGVVL KAFPPKVLLE LEKISKQVIE
EQANQDPLMR KVYAAYHAYE QGVRQYHKIS EDAYSQQRQH
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