Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3432 |
Symbol | |
ID | 5372710 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 4074631 |
End bp | 4075677 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640831692 |
Product | ApbE family lipoprotein |
Protein accession | YP_001367622 |
Protein GI | 153001941 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0771789 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTCAGA CCTTAAAGAT CAATACCTCA GCACTAAAGC ATTCATTTAA CTGGCTAGTC CTCGTAGGGC TGGCCTTTTT TGTTTCAGCC TGTTCTAAGC AGAACGAAGT CATTTCGTTA GCGGGTAGCA CTATGGGGAC GACTTACCAT ATTAAAGTCG TGCCGAATGA GCAGATGCCG ACAGCGCAGT TACTTCAAGC GGAAATTGAT TTAGCCCTTG AGCTGGTCAA TGACCAGATG TCGACCTATC GCCCTGATTC AGAATTATCC CGTTTCAACC AGTTGCCATT GGAGCAAAGC GTTGAAGTCT CACCGGATAC CATCAAAGTG GTGCAAGAGG GAGTACGCTT ATATCAAGTG ACGGATAAGG CACTTGATAT TACCTTAGGT CCTTTAGTTA ACCTGTGGGG ATTTGGGCCA GATAAGCGTC CAACAAAGGT CCCGAGTCAG GCCGATATCG ATGCGGCAAA AGCCAAAACC GGTATTAGTG AACTTTCCAT TGAAGGTAAC CGTCTAACTA AGCACAACGC CCATTTATAC GTAGACCTAT CGTCGATTGC CAAAGGGTTT GGGGTTGATA AAGTGGCTTC CATTCTTGAT AAATACCACG CGACTGGGTA TTTAGTTGAA ATTGGTGGTG AGCTCAGCAT TAAAGGTGCT AAAGGCGATG GTAGCTCTTG GCGCGTTGCC ATAGAGCAAC CGACCGATGA CGGTTCTGAA GCCGTACAGC AGGTTATCTC ACCAGGTACT ATGGCGATGG CGACCTCAGG CGATTATCGT AATTATTATG AGGAAGACGG CCAACGTTTT ACCCATATAA TTGATCCGCG TACCGGTTTG CCAATCAATC ATAAGCTAGC ATCCGTGACC GTATTGCATC AAAATTGTAT GACGGCCGAC GGTTTTGCGA CGGCTATGAT GGTTTTGGGC ACAGAAGCAT CATTGGAGCT TGCCAAGAAG GAACACTTGG CGATAATGCT TATCGAAAAG CAAGGCGACG GATTTAAGGT CTACTATAGC GACGCCTTCA AGCCTTTCCT TATTTAG
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Protein sequence | MFQTLKINTS ALKHSFNWLV LVGLAFFVSA CSKQNEVISL AGSTMGTTYH IKVVPNEQMP TAQLLQAEID LALELVNDQM STYRPDSELS RFNQLPLEQS VEVSPDTIKV VQEGVRLYQV TDKALDITLG PLVNLWGFGP DKRPTKVPSQ ADIDAAKAKT GISELSIEGN RLTKHNAHLY VDLSSIAKGF GVDKVASILD KYHATGYLVE IGGELSIKGA KGDGSSWRVA IEQPTDDGSE AVQQVISPGT MAMATSGDYR NYYEEDGQRF THIIDPRTGL PINHKLASVT VLHQNCMTAD GFATAMMVLG TEASLELAKK EHLAIMLIEK QGDGFKVYYS DAFKPFLI
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