Gene Shew185_3427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3427 
Symbol 
ID5373677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp4069613 
End bp4070689 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content49% 
IMG OID640831687 
ProductDNA polymerase IV 
Protein accessionYP_001367617 
Protein GI153001936 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGAAAAA TTATTCACAT CGATATGGAC TGCTATTTTG CGGCAGTGGA AATGCGCGAT 
TTTCCCGAAT ACCGTGGCAA GCCTTTAGCT GTGGGCGGCA GCAGCGATCG TCGTGGTGTT
ATTAGCACTT GCAGTTACGA GGCACGTAAA TTCGGTGTGC GTTCGGCGAT GGCGACCGCT
TATGCCTTTA AGTTGTGTCC CGATCTCATT TTGGTTCCTG GGCGGATGCA GGTTTATAAA
GATGTGTCGC TGCAAATTCG TGAAATTTTC TCCCGCTATA CCCAATTGAT TGAGCCGCTT
TCTTTAGATG AAGCCTATTT AGACGTGAGT GAGTGCCAAC AATATAAGGG CTCGGCGACC
TTGATTGCGC AGGCCATTCG CCGCGATATC TTAGCCGAAA CTGGGTTAAC CGCTTCGGCA
GGCATAGCCC CTGTGAAGTT TTTGGCTAAA GTTGCCTCGG ATTTGAATAA GCCAAACGGC
CAATATGTGA TTACCCCTGA AACACTTCCT GAGTTTGTTA AAACCTTATC GCTGCGTAAA
ATTCCCGGTG TCGGCAAAGT CACCGCCGAA AAGCTCTCCT CGCTTGGGCT CAATACCTGT
GGTGATGTGC AAGCTTATTC TAAACCTGAG TTATTGGCGC GATTCGGCAA GTTTGGTGGC
GTGTTGATTG AGCGTTCCCA AGGCATCGAT GAGCGGGGCA TTTCCGCTGA CAGGGAGCGT
AAATCAGTCG GTGTTGAAAC CACGCTGGCG AAGGATATTT ATAGCTTAGA GCAGTGCCAA
CAAGTAATGC CGGGGTTGAT CCAAGAATTA GCCCTACGTT TGAGTCGCAG CGCTAAGGAA
CGCAAAATTC ACAAGCAAGT GGTCAAGCTC AAGTTTAATG ATTTCAAGCA AACCACTATC
GAGCATCGTA GCGATGAAGT CTCGATTGTG ATGTTTTATG ATCTACTCGC ACAGGCGATG
GCAAGGCAAG AGGGCCGCGG CATTCGCCTA TTAGGTATTT CGGTCGGCCT CGCCGATTCT
ATCCTCGCAG TGCCCGAAAT CCCAAATGCC CAGACTCAGC TTGATTTAGC GCTCTAG
 
Protein sequence
MRKIIHIDMD CYFAAVEMRD FPEYRGKPLA VGGSSDRRGV ISTCSYEARK FGVRSAMATA 
YAFKLCPDLI LVPGRMQVYK DVSLQIREIF SRYTQLIEPL SLDEAYLDVS ECQQYKGSAT
LIAQAIRRDI LAETGLTASA GIAPVKFLAK VASDLNKPNG QYVITPETLP EFVKTLSLRK
IPGVGKVTAE KLSSLGLNTC GDVQAYSKPE LLARFGKFGG VLIERSQGID ERGISADRER
KSVGVETTLA KDIYSLEQCQ QVMPGLIQEL ALRLSRSAKE RKIHKQVVKL KFNDFKQTTI
EHRSDEVSIV MFYDLLAQAM ARQEGRGIRL LGISVGLADS ILAVPEIPNA QTQLDLAL