Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3404 |
Symbol | |
ID | 5370460 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 4042257 |
End bp | 4043066 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640831664 |
Product | peptidase M48 Ste24p |
Protein accession | YP_001367594 |
Protein GI | 153001913 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00000146898 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATCAA TGCGTTTAGG CTTAGTGGGT TTGGCGGTCG TGCTCGGATT ATCGGCCTGC GCAACCACGC AATCGCCAAC AGGGCGGGGG CAGACTTTGC TCTTTTCAGC GGCGCAGATG CAGCAGATGG GTGATGCTTC TTTTGAAGAG ATGAAAAAGC AGCAAAAGGT GAGTAGCGAT AAAAAGCTGA CGCAATACGT GAATTGTGTC GCTAATCGGG TAACAGCAGT GCTACCGGAT CAAACCCAGC GCTGGGATGT CGTCTTGTTT GACTCTGAAC AAGTTAACGC CTTTGCACTG CCGGGCGGCC ACATTGGTGT CTATAGCGGC TTACTTAAGG TCGCCAATGG TCCTGATCAG CTTGCCACTG TGCTCGGTCA CGAAGTGGCG CACGTGTTGG CGCAACATGG TAACGAGCAG GTTTCTCGCG GACAGTTAAC GGGCGTCGGT ATGCAAATAG CCGATGCGGC GTTGGGGGCG AGTGGTGTGT CGAATCGCGA CTTATATATG TCGGCGTTAG GACTAGGTGC TCAGGTTGGG GTGATTCTGC CCTTTGGCCG CGCTCAAGAG AGCGAAGCCG ATATCATGGG GTTAGAGCTG ATGGCGCGGG CCGGTTTCGA TCCGGCGCAA AGTGTGACCT TATGGCAGAA CATGTCGAAG GTAGGCGGCA GTCAAGGGCC GGAATTATTA TCGACTCATC CATCGAACAG TAATCGCATC GCTCAGTTGC AACAACTGCA AGGGCAGATG CAGCCACTCT ATGCCAGTGC TAAAACCCAA GTGAAGAATC AATGTGTGGC GCCGAAATAA
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Protein sequence | MKSMRLGLVG LAVVLGLSAC ATTQSPTGRG QTLLFSAAQM QQMGDASFEE MKKQQKVSSD KKLTQYVNCV ANRVTAVLPD QTQRWDVVLF DSEQVNAFAL PGGHIGVYSG LLKVANGPDQ LATVLGHEVA HVLAQHGNEQ VSRGQLTGVG MQIADAALGA SGVSNRDLYM SALGLGAQVG VILPFGRAQE SEADIMGLEL MARAGFDPAQ SVTLWQNMSK VGGSQGPELL STHPSNSNRI AQLQQLQGQM QPLYASAKTQ VKNQCVAPK
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