Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3401 |
Symbol | |
ID | 5373693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 4039193 |
End bp | 4040368 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640831661 |
Product | carbamoyl phosphate synthase small subunit |
Protein accession | YP_001367591 |
Protein GI | 153001910 |
COG category | [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism |
COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00720177 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGGTCG CGTTGACAAA GTCTGCCTTA CTCGTACTCG AAGATGGAAC TGTATTCTCT GGCACAGCAA TTGGTGCCGA TGGTCTCTCT GTTGGTGAAG TTGTTTTTAA CACTTCCATG ACAGGTTACC AAGAAATTTT AACTGATCCA TCCTACTCAC GCCAGATTGT AACATTAACC TACCCACACA TAGGCAACAC TGGTACCAAT GATGAAGATG TTGAATCCGA TGGGGTTCAC GCTTGTGGTC TTATCATTCG TGATCTTCCG CTCATCGCAA GTAGTTTCCG CAATCAACAA AGCTTAAGTG ATTATCTCAA AGCGAACAAT GTCGTTGGCA TAGCAGATAT CGATACCCGC AAGTTAACTC GTATTCTCCG TGAAAAAGGT GCACAAGCCG GTTGTATTAT GGCAGGTGCA GATTTAGACG AAGCAAAAGC GCTCGCCGCT GCCAAAGCCT TCCCCGGTTT AAAAGGCATG GATCTCGCTA AAGAAGTCAC AACTAAAGCG GCCTATCCAT GGCGCAAAGG TAGCTGGCGT TTAGTGGGCG GTTTACCTGC AGATACGCCA GTAAATGAGC TTAAATACAA AGTAGTAGCC TACGACTACG GCGTTAAGCA AAACATTCTG CGTATGTTAG TGGACCGCGG TTGCGACGTC ACTGTTGTGC CAGCTAAAAC CTCTGCCGCC GACGTGCTGG CGATGAATCC CGATGGTGTG TTCCTTTCGA ACGGCCCTGG CGATCCAGAA CCATGCGATT ACGCAATTGA AGCGATTCAA CAGATCCTGA AAACCGACAC ACCGATTTTC GGTATCTGTT TAGGTCATCA GTTGTTGGCT CTGGCCTCAG GTGCAAAAAC CTTAAAGATG AAGTTTGGTC ACCATGGTGC AAACCACCCA GTGAGCAACA TCGAGAAAGG TAACGTGATG ATCACCAGCC AAAACCACGG TTTTGCTGCC GATGAAACCA CGCTACCCGC CAACATTAAG GTGACGCATA AGTCGCTGTT TGATGGTTCA CTGCAAGGTA TCCATCTTAC GGACAAACCT GCGTTCAGCT TCCAAGGTCA CCCTGAAGCG AGCCCTGGCC CGAACGATGC CGCACCTCTG TTCGATCACT TTATCGAGCT AATCGAACAC TATCGTCTTG TAACGAAACG TCAGAACGCT AAGTAA
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Protein sequence | MEVALTKSAL LVLEDGTVFS GTAIGADGLS VGEVVFNTSM TGYQEILTDP SYSRQIVTLT YPHIGNTGTN DEDVESDGVH ACGLIIRDLP LIASSFRNQQ SLSDYLKANN VVGIADIDTR KLTRILREKG AQAGCIMAGA DLDEAKALAA AKAFPGLKGM DLAKEVTTKA AYPWRKGSWR LVGGLPADTP VNELKYKVVA YDYGVKQNIL RMLVDRGCDV TVVPAKTSAA DVLAMNPDGV FLSNGPGDPE PCDYAIEAIQ QILKTDTPIF GICLGHQLLA LASGAKTLKM KFGHHGANHP VSNIEKGNVM ITSQNHGFAA DETTLPANIK VTHKSLFDGS LQGIHLTDKP AFSFQGHPEA SPGPNDAAPL FDHFIELIEH YRLVTKRQNA K
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