Gene Shew185_3397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3397 
Symbol 
ID5372637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp4032835 
End bp4033923 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content46% 
IMG OID640831657 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001367587 
Protein GI153001906 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGTTTA ATTCCCAGCT CAAAGCTGAA AATAAGGCGC TTAAAGAGCG GCTTATCCAA 
TTAGAACAAC AACGCCAAAA TGAAATCGAT GAACTGCGTA GCATGATCCG TGAAAATGAG
ACTATGCAGC AGCAATCACG GCAAAATGCG GATCACTACA CTGAGGTCAT TGCCTGCCAA
AACCAAGGTG GAGACATGCT CAATGCGGTG CGCGAAGGCT TAGCCAACAG CGCCGAATTA
CTTACCGCTG AACAAGATTC ACTGTCAGAG CTCGATAAGA TTTTTGATCA AACACGCATC
GCAGTGGCAA GTTTAGGCAC TAGGGCGACT TATATTAATG AGCAAGCGTC GAGCAGTATG
AAAGCCGTTA CTGAACTAGA TGCGACGACC TCTTCAATTA ACCAATTTGT CGCCGCGATT
CAAGGCATCT CAGAACAAAC AAACTTGCTG GCATTGAATG CCGCCATTGA AGCCGCTCGC
GCAGGTGAAG CGGGACGCGG TTTTGCTGTG GTTGCCGATG AAGTACGCCA GCTTGCCAGT
AAAGCCCACG AAGCCAGTAG CCACATTGAA AAACTCGTAA AACAAATCGT TATTCAAGCG
GCAGAAATTA AAGAAATTGT CCATAACAAT CAAAGTAGCG CTATTGACGT GGCCAGCTCT
TCTACCCAAA TCGGCCAAGT GGTCGAGGAT GTACTGAATC GTTCAAAGCA AATGCAGCAG
GTTATCCATA ACGCTGCTAC CGCGTCATTC TTAAATACCA CTAAGCTCGA CCACGCGGTT
TGGAAAAGCA GTGTTTATCA ATTAATTGAA AAACCACAGC ATAATCACAG TGTAAACTCG
CACACTGAGT GCCGTCTCGG ACAATGGTAT TTCAAAGGGT TTGGGGCTGA GAATTATCAG
CATTTGAGTA ACTTCAAAGC CTTAGATGCA CCACATAAAG CGGTGCACGA AGCAGGTAAA
GCCGCACTCA ATGCCAGACA AAAAGGTAAT TTACCTGAGA TGGTCAAACA ACTGCACTCA
ATGGAAGACG CCAGTATGCG CGTTGTGCAC TGTATTGATA ATCTGATGCG TGACGTCTAT
CGCGCCTGA
 
Protein sequence
MWFNSQLKAE NKALKERLIQ LEQQRQNEID ELRSMIRENE TMQQQSRQNA DHYTEVIACQ 
NQGGDMLNAV REGLANSAEL LTAEQDSLSE LDKIFDQTRI AVASLGTRAT YINEQASSSM
KAVTELDATT SSINQFVAAI QGISEQTNLL ALNAAIEAAR AGEAGRGFAV VADEVRQLAS
KAHEASSHIE KLVKQIVIQA AEIKEIVHNN QSSAIDVASS STQIGQVVED VLNRSKQMQQ
VIHNAATASF LNTTKLDHAV WKSSVYQLIE KPQHNHSVNS HTECRLGQWY FKGFGAENYQ
HLSNFKALDA PHKAVHEAGK AALNARQKGN LPEMVKQLHS MEDASMRVVH CIDNLMRDVY
RA