Gene Shew185_3392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3392 
Symbol 
ID5371233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp4026662 
End bp4027561 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content49% 
IMG OID640831652 
Producthypothetical protein 
Protein accessionYP_001367582 
Protein GI153001901 
COG category[S] Function unknown 
COG ID[COG3220] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGCAAG ATGTCATCAC GCAAGCACCA TTAGGTTTTG GCTTAGGTCT TAGGACGCAG 
CATTTTGATG CCGTGCTCAA TACCGAACCC GATATCGATT GGTTTGAAGT GCTCTCGGAA
AACTACATGG TCGCCGGCGG TAAACCCCGC TATTACCTCA AGGAAATTGG CGAGCGTTAT
CCCTTAGTCA TGCACGGTGT TTCCCTGTCG ATTGGCAGTA CCGACCCGCT CAATATGGAT
TACCTTAAAG CCTTAAAACA GCTCGCCAAC GAGGTGCAGC CCCAATGGAT TTCCGATCAT
ATCTGCTGGA CCTCAATTCA CGGGGTGAAC AGCCATGATC TCCTGCCACT GCCCTATACC
GAAGAAACCG TTAAGCATGT AGCGCAGCGG ATTAAAACCG TCCAAGACTT TTTAGGTCGG
CGCATTTTGA TGGAAAACGT TTCTAGCTAC TTGTCGTATC AAGATTCCAG CATGGACGAA
TGGGAATTCG TTAATACCGT TGCTGAGGCA GCAGACTGTT TAATCTTGTT AGACATCAAT
AATATTTACG TCAGTGCCCG CAATCACAAT TTCAACCCGT TGGACTATTT AAATAAAATC
AATCCCAAAC GGGTGCAGCA ATTCCACCTC GCCGGACACA GCGACTATGG CGACTATGTG
ATAGACACAC ACGACCATGA TGTACCGAGC AGCGTGTGGG ACCTCTACTG TGCAGCACTG
AAACGTTTTG GCGGCATCAG CACTATGATA GAGCGCGACG CCAATATCCC CGAGTTTTCC
GCCCTCGAAG CCGAACTCAC GATTGCCAGA AATATCGCCC GCGATACCTT AGGTGAGGCG
CATCCACTCA ACGCTGCCAA GGATAGAAAG AACATGCATG AAGGAAAGGT TATCGCATGA
 
Protein sequence
MAQDVITQAP LGFGLGLRTQ HFDAVLNTEP DIDWFEVLSE NYMVAGGKPR YYLKEIGERY 
PLVMHGVSLS IGSTDPLNMD YLKALKQLAN EVQPQWISDH ICWTSIHGVN SHDLLPLPYT
EETVKHVAQR IKTVQDFLGR RILMENVSSY LSYQDSSMDE WEFVNTVAEA ADCLILLDIN
NIYVSARNHN FNPLDYLNKI NPKRVQQFHL AGHSDYGDYV IDTHDHDVPS SVWDLYCAAL
KRFGGISTMI ERDANIPEFS ALEAELTIAR NIARDTLGEA HPLNAAKDRK NMHEGKVIA