| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3345 |
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| Symbol | |
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| ID | 5370093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 3984080 |
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| End bp | 3986197 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640831604 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001367535 |
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| Protein GI | 153001854 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCGAT TTGGTAAGTT TTACCCACAA TCAAAGTGGG TTATCGGTTC TCTTGCGCTG
GGGCTTAGCG CTATTTCAGG CTCAACTATT GCTGACAGTG GAACTGCTCC AGATAAGCAA
TCCAAGCAAC AAGATGCAGC GGGAAATATT GAAGTCATCA CAGTTTACGG TCAGAAAATC
GAGCGAACGT TGAAAGAAAC TGCGAGTTCA GTGACGGTCA TCACTGAAGA ACAGTTGAGG
AAAAATGCGG ACCAATCAAC GATTTCTGAA ATTCTCGGCG GTACGCCAAA CTTAATTTAT
GCCGGAAATA CCGATGCGCC CATTATCCGC GGTACGGATA CCAAAGGGCC TGTAGCAGCG
GGTAATGCCT ATTTATCTAA GCCTGTACCC GGAGCAACTA TCAGTGTTGA TGGTAAATAT
CTGAGCCCCG CAGAACTGGA TTTAGGCGCC GCAGGCGTGT GGGATGTGTC GTCTATTGAA
GTCTATCGTG GTCCGCAAAC GACCAGTCAA GGAGCCAACA GTATTGCTGG CGCCGTAGTC
ATTCATACCC ATAACCCCAC TTATACGCCA GAATTTGCAG CGCAAGCACT TTATGGCAGT
CGGAATAAGA AGCGCTTTTC GGTCATGGCG TCCGGTGCGC TAAGCAATGA CTTTGCCGCA
AGAATTAGCG CAGATTACAG CGCTAGAGAT ACCTTTGTTG ATTACGTTAA TCCAGAATTT
ACTGCCCATG ATTTGGATTT TGAGTTTAAA AACCAAAATC TACGGGCGAA GTTGCTATGG
GAACCCGAAA AATACAGTAA CTTTTCCGCC ATGCTGACTT ATTCCTCCAC TGAGGCTAAA
CGTCCCAGAA ATGAGGTGGT ATCAGAACCC TATGATGACT TAGAAAATCG TTCAATTTTT
CAGGACAATC AAGAAGTCAG TAATCATGTC GGGATTTTTG ATCTTGAATA TGTGTTCGAC
AATGGTATGA AGTTGCATAA CCAAATGCAG TATTCAGAGG GGCAGTTTGA TTATCGCTTC
GCAGCACCTT ATCAAGGGAT CGCAAAACGA GATAATGAAA ACTTTTCGAA TGATATAAGG
CTGAACTTTG GTGACAAGAG TTCAGAGTTT AGTGGGGTTG CCGGTGTCTT CTACTGGGAC
GATAAAACGA ATAACAAGCT GAACAACGTA TTTGGTAATG CCGACGCCGA TCTGAGGCAT
ACCAGTTTTG CCCCCTACGG TGAAGTCATA TGGCGCTTCT CGCCTAAGTG GGCATTCACC
AGCGCACTTC GTTATCAGTC TGATGAAATT AGCCACGATG GTATTGCCAG CTACATCCCA
GGTGTGCGCC ATCAATATGA AGAGACGTTT ACGGCGTTAT TACCTAAGGT TGCCCTGTCC
TATGATCTGA CTGATAACGT CCTAATCGGC GCTATGATCA GTGAAGGCAA TATTCCTGGT
GGTACAGGCA TTAACTTCCG CGGTGGCGAA TATTATACAT TCGATGCCGA GTCGGCATGG
AACTATGAAC TTTTTACCCG TATCGATCTG CTTGAACAAC GCTTGATCAT AAATAGCAAT
CTCTTTTACA CCCGCTTTAA AGATTCACAA CGTTCAGTTA CTGACTACCT AGATGGACGA
CCCTTTGGTT CTGTCATTAT TAATGCCGAT GAAGCGCAGA GCTATGGCAT TGAATTAGAT
TGGAACTTTA AAGTTGCCGA TAGTTTTAGC TTATATGGTG GGCTGGGTTT ACTTGAAACT
GAGATAAGTG AATTTAATGA CTACCGTGGC GAGGAGTTTG TCGGCAACGA GTTTAGTAAA
GCGCCAGGAT ATATGTTCAA TCTTGGGTTT GACTATGCGA TTACCGACGC CTTTAAAGTG
AGCGGTGATG TGCGTCATAC GGATGGATAC TTTTCAACGG ATACCAATGA GCCTGAGTTA
AGAGTGGGGT CTTACACAAC GGTAAACCTG AATTCTTCCT ATCAAATCAA CCAATATTTT
GAAGCCTTTG TTTATGCGCG CAATTTACTG GATGAACGTG CTCCTGTGGC AAAAATGGCT
GACAGAAGTA CCGGAGGCGT GGATGCATAT TTACTTGAAC CACGAGAAAT AGGCGTAGGC
GTTAGGGCGA AGTTTTAG
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| Protein sequence | MPRFGKFYPQ SKWVIGSLAL GLSAISGSTI ADSGTAPDKQ SKQQDAAGNI EVITVYGQKI
ERTLKETASS VTVITEEQLR KNADQSTISE ILGGTPNLIY AGNTDAPIIR GTDTKGPVAA
GNAYLSKPVP GATISVDGKY LSPAELDLGA AGVWDVSSIE VYRGPQTTSQ GANSIAGAVV
IHTHNPTYTP EFAAQALYGS RNKKRFSVMA SGALSNDFAA RISADYSARD TFVDYVNPEF
TAHDLDFEFK NQNLRAKLLW EPEKYSNFSA MLTYSSTEAK RPRNEVVSEP YDDLENRSIF
QDNQEVSNHV GIFDLEYVFD NGMKLHNQMQ YSEGQFDYRF AAPYQGIAKR DNENFSNDIR
LNFGDKSSEF SGVAGVFYWD DKTNNKLNNV FGNADADLRH TSFAPYGEVI WRFSPKWAFT
SALRYQSDEI SHDGIASYIP GVRHQYEETF TALLPKVALS YDLTDNVLIG AMISEGNIPG
GTGINFRGGE YYTFDAESAW NYELFTRIDL LEQRLIINSN LFYTRFKDSQ RSVTDYLDGR
PFGSVIINAD EAQSYGIELD WNFKVADSFS LYGGLGLLET EISEFNDYRG EEFVGNEFSK
APGYMFNLGF DYAITDAFKV SGDVRHTDGY FSTDTNEPEL RVGSYTTVNL NSSYQINQYF
EAFVYARNLL DERAPVAKMA DRSTGGVDAY LLEPREIGVG VRAKF
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