Gene Shew185_3336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3336 
Symbol 
ID5370361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3971332 
End bp3972561 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content50% 
IMG OID640831595 
Productgalactokinase 
Protein accessionYP_001367526 
Protein GI153001845 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0153] Galactokinase 
TIGRFAM ID[TIGR00131] galactokinase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.325513 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCAAG ATACGTTGAA CCTTACTCAA CATAGCGCTA ACGATATTAA TATCCATGCT 
ATGAGCCAAG CCGTGACTCA GTCAGATATT CTTGCCCAGC TTGAGCAGGC GTTTGTACAA
CACTTTGGCT ATGCGGCTCA GCAAGTTTGC CATGCGCCAG GTCGAGTCAA TTTGATAGGT
GACCATACTG ATTACAACGG CGGTTTTGTA TTACCCGCTG CGATCAATTT TGGCACTTGG
GTGGCGGGTC ATACTCGAAA CGACCGCATT ATCAATGTGG TGGCGCTGGA TTGTGCTGGC
GAGCGTGTCA GCTTTTCCCT CGATGATATC GCTTTTGATA AGGTTTCGTC GTGGAGCAAC
TATGTCCGCG GCAGTTTGAT TGCACTGGCT AAAGCATTAC CAGATTTTGG TGGTGCCGAT
TTAGTGGTCA AAGGTAATGT GCCTCGCGGT GCGGGATTAA GCTCATCGGC CTCATTTGAA
GTGGTGATCT TAAAGACCAT GGCAGCACTT TACGACTTGC CCTTGTCCGG TGTGCAAGCG
GCACTGATGG GTCAACAAGC AGAGAATGAG TTTGTGGGGT GTAACTGCGG CATTATGGAT
CAAATGATTT CTGCCATGGG TAAACAGCAC AACGCTATGT TACTTGATTG TCGCAGCCTC
GAAATCCAAT ACGCCCGCAT GCCTGAAGAT CTCGCCATCA TCATAGTTAA CTCCAATGTG
AAGCGCGGTT TAGTCGATAG CGAATACAAC ACGCGCCGTG GTCAATGTGA ACAAGCGGCG
GCCTTTTTAG GAAAAGCCTC ACTGCGTGAT GTGACTTTGG CTGAGCTTAA TGCCGCTAAA
GCCGAACTTG AACCTGTGCT TTATCGCCGC GCCCACCATG TGATCAGTGA AAGTATTCGT
ACTTGCGACA TGTTAGCCGC ACTGAATCGC CACGACATGG CAGAGATCAG TACGCTGATG
GCGCAGTCCC ATCGTTCACT CAAAAATGAT TTTGAAGTCA CAACCTCACA GTTAGACATT
CTAGTGTCCT TGTTGGCCGA CAAGCTCGGT GAACACGGCG GTGCTCGCAT GACAGGTGGT
GGTTTCGGTG GTTGTGTGGT CGCGCTGACT GAGCGTAGCC ATGTGGATAA GGTGCTTGGC
ACATTAGCCG AGGACTATCA CGCGGCGACA GGGCTTAAGG CCGATATCTA TTTATGCCAT
GCGGTCGATG GGGCCTTCGT TGCCGTTTAG
 
Protein sequence
MNQDTLNLTQ HSANDINIHA MSQAVTQSDI LAQLEQAFVQ HFGYAAQQVC HAPGRVNLIG 
DHTDYNGGFV LPAAINFGTW VAGHTRNDRI INVVALDCAG ERVSFSLDDI AFDKVSSWSN
YVRGSLIALA KALPDFGGAD LVVKGNVPRG AGLSSSASFE VVILKTMAAL YDLPLSGVQA
ALMGQQAENE FVGCNCGIMD QMISAMGKQH NAMLLDCRSL EIQYARMPED LAIIIVNSNV
KRGLVDSEYN TRRGQCEQAA AFLGKASLRD VTLAELNAAK AELEPVLYRR AHHVISESIR
TCDMLAALNR HDMAEISTLM AQSHRSLKND FEVTTSQLDI LVSLLADKLG EHGGARMTGG
GFGGCVVALT ERSHVDKVLG TLAEDYHAAT GLKADIYLCH AVDGAFVAV