Gene Shew185_3323 details

Gene Information

• Locus tag: Shew185_3323
• Symbol: lipB
• ID: 5370675
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: +
• Start bp: 3955904
• End bp: 3956557
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640831582
• Product: lipoate-protein ligase B
• Protein accession: YP_001367513
• Protein GI: 153001832
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0321] Lipoate-protein ligase B
• TIGRFAM ID: [TIGR00214] lipoate-protein ligase B

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.00233986
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCAAGACA CGACTTTGCA CATTCGACAT CTTGGAAAAC AAGATTACGA ATCAGTGTGG 
CATGCGATGC AGCATTACAC TGATACGCGC GACAGCGAAA GCCATGATGA ACTGTGGATT 
GTCGAGCATC CGCCCGTGTT TACCCAAGGC CAAGCCGGCA AAAGCGAGCA TATTTTAAAT 
GCTGGCGATA TTCCGGTTAT CCAAGTGGAC CGTGGCGGTC AAGTCACTTA CCACGGCCCA 
GGCCAACTAG TGGTATATCC TCTTCTCGAT ATAAAACGTA GTAAAGTCGG CGTACGTCAA 
CTCGTCACCC ATATAGAGCA AAGCATTGTC GATATGCTCG CCAAGTACGA CATTAACGCT 
TATGCCAAGG CAGATGCGCC AGGCGTATAT GTGGATGAAC GCAAAATCGC CTCCCTAGGA 
TTACGCATTC GTAAAGGCTG TTCATTCCAT GGATTAGCCC TCAATGTCGA CATGGATCTG 
GCGCCATTTC GCCGCATCAA CCCTTGTGGT TATGCCGGTC TTGAAATGGT GCAATGCAAA 
GCGCTTGGCG GACCACAAAC CGTGATTGAA GCGGGCGAGC AACTCACCAT TACTTTTAGC 
CAATTACTGG GCTATCAACA CCTAGTTCAT CATCAAGGAT TAGCAGCGTC ATGA 

 

Protein sequence

MQDTTLHIRH LGKQDYESVW HAMQHYTDTR DSESHDELWI VEHPPVFTQG QAGKSEHILN 
AGDIPVIQVD RGGQVTYHGP GQLVVYPLLD IKRSKVGVRQ LVTHIEQSIV DMLAKYDINA 
YAKADAPGVY VDERKIASLG LRIRKGCSFH GLALNVDMDL APFRRINPCG YAGLEMVQCK 
ALGGPQTVIE AGEQLTITFS QLLGYQHLVH HQGLAAS