Gene Shew185_3321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3321 
Symbol 
ID5370673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3954248 
End bp3955423 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content45% 
IMG OID640831580 
ProductSerine-type D-Ala-D-Ala carboxypeptidase 
Protein accessionYP_001367511 
Protein GI153001830 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1686] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.39349e-10 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAATT TTGTAAAAAG TCCCATTAAA ACATTGCTGC TAATTTCCAG TGCCTCTCTC 
CCCGTTTATG CTGCGCAGCC TATTATTACA CCTGATGCAC CTTCAGTAGC CGCCAAGGCG
TTCGTATTGA TGGATTATAA TTCGGGTCAG ATTATCGCTG AAAGTAACGC TTACGAAAGC
CTTAACCCAG CCAGTTTAAC TAAGATGATG ACCAGTTACG TGATCGGTCA AGAAATCAAA
GCGGGCAATG TCTCCGTTGA TGATGATGTG ACTATCAGTA AAAATGCTTG GTCTAAAAAC
TTCTCAGACT CTTCTAAGAT GTTCATTGAA GTGGGCACTA CGGTTAAAGT GGGCGACCTA
AACCGCGGTA TCATTATTCA ATCGGGTAAC GATGCGTGTG TGGCGATGGC CGAGCACATT
GCTGGTACTG AAGGCGCCTT CGTTGACATG ATGAACTCAT GGGCGAAGCA ATTGGGGATG
CGTGATAGCT ACTTCGAAAA CGCCCACGGT TTAGATGCAG AAAACCACAA ATCAACCGCC
TATGATATGG CATTACTGGG CGCAGCGTTA ATCCGCGACG TGCCAGATGA ATACCACATC
TATAGCGAAA AATTCTATAC ATTCAATGGT ATCAAACAAT ACAACCGTAA TGGTTTATTG
TGGGATAACA GCATGAACGT GGACGGTATC AAAACCGGTC ACACCTCAGG TGCAGGCTAC
AACTTAGTAG CATCAGCAAC CAAAGACGGC ATGCGTTTAA TTTCAGTGGT GATGGGCACT
CAAAGTGAAT CTGCCCGTAA AGCTGAAAGT AAGAAATTAC TGACCTATGG CTTCCGTTTC
TTCGAAACCG TAACACCATA CAAGGCGGGC GATAGCTTTA TCACTCAGCA AATTTGGTAC
GGTGACAAGA GCACGGTTGA TTTAGGCGTG GCAACTGACA CACCTATCAC CATCAGCCGT
GGCCGTGGTA AAGACTTGAA AGCTAACTTC GAGCTGACTA AGCCATTAGA TGCACCGTTG
AAAAAAGGTG AAACTGTTGG CCGTCTATTC TTCCAACTTG ATGGTAAAGA CATCGCCCAG
TTCCCACTGG TGACGTTGCA AGAAGTCAAC GAAGGCAGCT GGTTTAGTAA ATTAGTAGAT
TACTTTAAAC AGATGTTTTC TGGATGGTTT AGCTAA
 
Protein sequence
MMNFVKSPIK TLLLISSASL PVYAAQPIIT PDAPSVAAKA FVLMDYNSGQ IIAESNAYES 
LNPASLTKMM TSYVIGQEIK AGNVSVDDDV TISKNAWSKN FSDSSKMFIE VGTTVKVGDL
NRGIIIQSGN DACVAMAEHI AGTEGAFVDM MNSWAKQLGM RDSYFENAHG LDAENHKSTA
YDMALLGAAL IRDVPDEYHI YSEKFYTFNG IKQYNRNGLL WDNSMNVDGI KTGHTSGAGY
NLVASATKDG MRLISVVMGT QSESARKAES KKLLTYGFRF FETVTPYKAG DSFITQQIWY
GDKSTVDLGV ATDTPITISR GRGKDLKANF ELTKPLDAPL KKGETVGRLF FQLDGKDIAQ
FPLVTLQEVN EGSWFSKLVD YFKQMFSGWF S