Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3319 |
Symbol | |
ID | 5370850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 3952219 |
End bp | 3953289 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640831578 |
Product | lytic murein transglycosylase B |
Protein accession | YP_001367509 |
Protein GI | 153001828 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
TIGRFAM ID | [TIGR02282] lytic murein transglycosylase B |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000245768 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTACTC TCCGAGCTTT TCTAGCTCCA CTCGGTTTAC TGTGTTTTAG CTCATTGTTA GTCGCCTGTA CCACGGCGAA CGAACCGACA TCTGCGCAGG CACCCGTTCC AAGCACGCCA GTGGCTCCGG CCGCTGAAAT CGCGCCCACA ATTCCCGCTG AACTCAAAGA AGAGTTTATC AAAGCTCAAA TAAAACAAGG TTTTACTCGT GCAGAAGTGC TCGCTTTTCT CGACAAGGCA AAATACAACC AAGGGGTTAT CGATGCGATG ACCCGTCCAT GGGAAGCAAA ACCTTGGCAT GTGTATTATC CAATTTTCTT AACGGAAAAA CGCCTTGAAG CTGGTCTCGC CTTTTGGAAA AAACACGAGA AAACCATCGC AAAAGCCGCG GCCAAGTACA AAGTTGACCC ACAGATTATT GTCGCCATTA TCGGCATTGA AACCTTCTAC GGCCAATACA CGGGCAATTA TCCCGTAATT GATGCCCTCT ATACCTTAGG GTTTCACTAT CCGCCGCGCG CCACCTTTTT CCGTAAGGAA TTTGGCGAGT TGATGAAGTT AGTGAAAGAA GAACATTTAG ATATAGATAC CCTCAAGGGC TCCTACGCAG GCGCTATGGG TTATGGCCAG TTTATCCCAT CAAGTTACCG CCATTACGCG GTTGATTTCG ATGGCAGCGG CAACCGCGAT TTATTACAAA GTCCTGAGGA TGCCATCGGC AGTGTGGCCA ATTATTTCCA TGAACACGGT TGGCAAGCCA ATGCGCCGGT CGCTTTACCG TTAGTGAATA ACAGCAAAAC TGCACCTAAA GCGAAAGTGT GGGCAGGTGA AAAGCTGAAC TATAAAGTTG CAGATATTTT AACGCCGACC TTAGCCTTAG CCGATGCGCG GGACTTAGAT GTTTCGCAAA AAGCCTTATT GATTGAGCTT GAACAAGCGG ATCACAGTGA CTACTGGCTT GGCTTAAATA ACTTTTATGT GATCACTCGC TATAATCGTA GCCCTTTGTA TTCAATGGCC GTTTATCAAT TTAGCCAACA ATTAAAAGAA CAGCATGCCT CTAAAAAATA A
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Protein sequence | MPTLRAFLAP LGLLCFSSLL VACTTANEPT SAQAPVPSTP VAPAAEIAPT IPAELKEEFI KAQIKQGFTR AEVLAFLDKA KYNQGVIDAM TRPWEAKPWH VYYPIFLTEK RLEAGLAFWK KHEKTIAKAA AKYKVDPQII VAIIGIETFY GQYTGNYPVI DALYTLGFHY PPRATFFRKE FGELMKLVKE EHLDIDTLKG SYAGAMGYGQ FIPSSYRHYA VDFDGSGNRD LLQSPEDAIG SVANYFHEHG WQANAPVALP LVNNSKTAPK AKVWAGEKLN YKVADILTPT LALADARDLD VSQKALLIEL EQADHSDYWL GLNNFYVITR YNRSPLYSMA VYQFSQQLKE QHASKK
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