Gene Shew185_3316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3316 
Symbol 
ID5370768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3948711 
End bp3949181 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content52% 
IMG OID640831575 
ProductrRNA large subunit methyltransferase 
Protein accessionYP_001367506 
Protein GI153001825 
COG category[S] Function unknown 
COG ID[COG1576] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.08815e-12 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTAC AGCTCATCGC AGTAGGAACA CGGATGCCCG ATTGGGTTAC CCGTGGTTTC 
GAAGAATACC AGCGCCGTTT TCCCCGTGAT ATGGCGCTGG AGCTCATCGA AATACCCGCT
GGAAAGCGGG GGAAAAATGC CGACATTGTC CGGATCCTTC AAAAGGAAGG CGAACAAATG
TTGGCGGCTA TTCCCAAAGG CAATCATATT GTTAGCTTAG ATCTCCCCGG CAAAAACTGG
ACGACCCCCG AGCTAGCAAC CGCGTTGACT AAATGGCAAC TGGATGGTCG CGATGTCAGT
TTACTGATTG GTGGACCGGA AGGATTAGCG CCAGCTTGCA AAGAAGCGGC AAACCAAAGT
TGGTGCCTGT CGGCATTAAC CTTACCTCAT CCCCTAGTAC GGGTTGTGGT CGCCGAAAGT
TTGTACCGCG CGTGGAGCGT GAACACGAAT CACCCCTACC ATAGAGAATA G
 
Protein sequence
MKLQLIAVGT RMPDWVTRGF EEYQRRFPRD MALELIEIPA GKRGKNADIV RILQKEGEQM 
LAAIPKGNHI VSLDLPGKNW TTPELATALT KWQLDGRDVS LLIGGPEGLA PACKEAANQS
WCLSALTLPH PLVRVVVAES LYRAWSVNTN HPYHRE