Gene Shew185_3299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3299 
Symbol 
ID5371623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3931481 
End bp3932572 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content46% 
IMG OID640831558 
ProductGTP-dependent nucleic acid-binding protein EngD 
Protein accessionYP_001367489 
Protein GI153001808 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0012] Predicted GTPase, probable translation factor 
TIGRFAM ID[TIGR00092] GTP-binding protein YchF 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.59769e-11 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTTTTA AATGCGGCAT TGTTGGTCTT CCTAACGTAG GTAAATCAAC GCTTTTTAAT 
GCGTTAACTA AGGCTGGCAT CGAAGCGGCT AACTTCCCGT TTTGTACCAT TGAACCTAAC
ACAGGTGTTG TACCTGTGCC GGATCCACGT CTGGATGCGT TAGCTGCGAT TGTGAATCCA
CAACGTGTGT TACCGACCAC CATGGAATTC GTAGATATCG CAGGCCTCGT GGCTGGCGCA
TCTAAAGGTG AAGGCTTAGG TAACAAGTTC TTAGCTAACA TCCGTGAAAC CGATGCCATT
GGTCACGTAG TGCGTTGTTT TGATGATGAC AACATTGTTC ACGTTGCTAA CAAGGTTGAT
CCAGCTGGCG ATATCGAAGT CATCAACACT GAATTAGCCT TAGCTGACTT AGACAGCTTA
GAGCGCGCGG TTCAACGCCA GCAAAAACGT GCAAAAGGCG GCGATAAAGA CGCTAAGTTT
GAAGTGGAAG TATTAGAAAA AATGCGTCCA ATTCTAGACG AAGCGAAAAT GCTGCGCTCA
ATGGAATTAT CTAAAGAAGA ACTGGAAGCC GTTGCTTACC TTAACTTCTT AACCTTAAAA
CCGACCATGT ATATTGCTAA CGTGGCGGAA GATGGTTTTG AGAACAACCC ACACTTAGAC
GCTGTTCGCG CCATTGCAGC GACAGAAAAC GCTATCGTTG TTGCTGTGTG TGCTGCGATT
GAATCTGAAC TGGCTGAGAT GGAAATCTCC GATCGCGATG AGTTTATGGC AGATCTGGGT
ATCGAAGAGC CAGGTTTAGA TCGCGTTATT CGTGCTGGTT ACCAATTACT GAATCTGCAA
ACTTATTTCA CCGCAGGCGT GAAAGAAGTG CGTGCTTGGA CTGTGCCAGT CGGTGCAAGT
GCTCCACAAG CGGCGGGCGT TATCCATACC GATTTTGAAC GCGGCTTTAT TCGTGCACAA
GTCATGTCCT ATGAAGATTT TATTGCCCAC AAAGGTGAAG CTGGCGCGAA AGAAGCCGGT
AAGTTACGTG TGGAAGGTAA AACCTATATC GTTAAAGATG GCGATGTGAT GCATTTCTTG
TTTAATGTAT AA
 
Protein sequence
MGFKCGIVGL PNVGKSTLFN ALTKAGIEAA NFPFCTIEPN TGVVPVPDPR LDALAAIVNP 
QRVLPTTMEF VDIAGLVAGA SKGEGLGNKF LANIRETDAI GHVVRCFDDD NIVHVANKVD
PAGDIEVINT ELALADLDSL ERAVQRQQKR AKGGDKDAKF EVEVLEKMRP ILDEAKMLRS
MELSKEELEA VAYLNFLTLK PTMYIANVAE DGFENNPHLD AVRAIAATEN AIVVAVCAAI
ESELAEMEIS DRDEFMADLG IEEPGLDRVI RAGYQLLNLQ TYFTAGVKEV RAWTVPVGAS
APQAAGVIHT DFERGFIRAQ VMSYEDFIAH KGEAGAKEAG KLRVEGKTYI VKDGDVMHFL
FNV