| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3275 |
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| Symbol | |
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| ID | 5369956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 3903270 |
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| End bp | 3905372 |
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| Gene Length | 2103 bp |
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| Protein Length | 700 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640831525 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_001367465 |
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| Protein GI | 153001784 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000261182 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATCCTA TTGTAAAGAG TTTTGAGTAT GGTCAACATA CAGTCACCCT GGAAACAGGT
GTTATAGCGC GTCAAGCAGA TGCAGCCGTT TTAGCGAGTA TGGGTGACAC GACTGTGTTG
GTCACTGTTG TCGGTAAAAA AGAAGCAGAT GCTGGTCGTG ACTTTTTCCC TCTGACTGTT
AACTATCAAG AAAAAACCTA CGCAGCAGGT AAAATTCCTG GTGGTTTCTT TAAGCGTGAA
GGCCGTCCTT CAGAAGATGA GACATTAATC GCTCGTCTGA TCGACCGTCC AATTCGCCCT
CTTTTCCCTA ATGGTTTCAA AAACGAAGTT CAAGTTATCA TTACTGTAGT ATCTGTCGAT
CCACAAATCG AGCCAGATAT CATCTCTATG ATCGGTACTT CTGCGGCACT GGCTATTTCT
GGTATTCCAT TCAGCGGACC TTTAGGTGCT GCACGTGTGG GTTACATTGA TGGCGAATAC
GTGTTGAACC CAAGTGTTGC GCAACTTGCA ACCAGCCAAC TGAACTTAGT GGTTGCTGGT
ACTGCTGGTG CAGTATTAAT GGTGGAATCA GAAGCCCAAG CATTACCAGA AGAAGTGATG
TTAGGTTCTG TTGTTTACGG TCACGATCAA CAACAAGTGG TTATCAAAGC GATTGCTGAA
TTTAAAGCAG AAGCCGGTAA ACCAACTTGG GATTGGACTG CACCAACGCA AGATGCCGAT
TTAGTTGCCC AAATCAAAGA GCTTGCTGAA GCTGGTTTAG GTGATGCGTA TAAGATCCAA
GTTAAACAAG ATCGTTATGC TCAAGTCTCT GTTGTTAAAG CAGCAACAAA AGAAGCCTTG
TTAGCTAGCA ATCCAAGCAT TGATTTACGT GAAGTAGACA ACTTGCTGGG TAGCTTAGAG
AAGAAAGTGG TTCGTGGTCG CATCATCCGT GGTGAGCCAC GTATTGATGG TCGTGAACCA
GACATGATCC GTGCATTGAG CGTGTTAGCG GGCGTATTGC CACGTACTCA CGGTAGTGCA
TTGTTCACTC GCGGCGAAAC TCAAGCGTTA GTGACTTGTA CTTTAGGTAC TGAACGTGAT
GCACAGAAGA TTGACAGCAT CATGGGCGAG CGCACTAACC GTTTCATGCT GCACTATAAC
TTCCCTCCAT ACTCTGTTGG TGAAACAGGC ATGGTGGGTT CACCTAAGCG CCGCGAAATC
GGTCATGGTA AGTTAGCATG GCGCGGTATC AATGCTGTTA TGCCTTCAGC TGCTGAATTC
CCATACAGCG TGCGCGTTGT ATCTGAAATC ACTGAATCTA ACGGTTCAAG CTCTATGGCG
TCAGTATGTG GTACTTCTTT AGCGCTGATG GATGCTGGTG TGCCTATCAA GACTTCTGTA
GCGGGTATCG CTATGGGTCT AGTGAAAGAA GGCGATGATT TCGTTGTTCT TTCTGACATC
TTAGGTGATG AAGATCATTT AGGTGACATG GACTTTAAAG TTGCGGGTAC GCGTGATGGT
ATTACTGCAC TGCAGATGGA TATCAAGATC GAAGGTATCA CTAAAGAAAT CATGGATATC
GCACTGCAAC AAGCCTATGG CGCACGTGTA CATATCCTGA ACGTGATGGA TCAAGCGATT
GGTTCACACC GTGATGATAT TTCTGATCAC GCTCCACGTA TCACTGTTAT TAAGATTAAC
CCAGAAAAAA TCCGTGACGT TATCGGTAAA GGCGGCGCAG TTATCCGTGC TCTTACTGAA
GAAACCGGCA CAACGATTGA ACTGGAAGAT GATGGTACTG TGAAGATCGC TTCTTCAAAC
GGCGAAGCAA CCAAAGAAGC TATCCGTCGT ATCGAAGAAA TCACTTCAGA AGTTGAAGTG
GGTCGTATCT ACAACGGTAA AGTTATCCGT ATCGTTGATT TCGGTGCGTT CGTGAACATT
CTGCCGGGCA AAGACGGTTT AGTACACATT TCACAAATCA GTGATGAGCG TGTTGCTAAC
GTGTCTGATC ACCTTGAACT GAACCAAGAA GTTGCTGTTA AAGTAATGGA AGTGGATCGT
CAAGGCCGCG TACGTCTGTC AATCAAAGAA GCACAAACTA AAGAAGCTGC CGCTGCTGAA
TAA
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| Protein sequence | MNPIVKSFEY GQHTVTLETG VIARQADAAV LASMGDTTVL VTVVGKKEAD AGRDFFPLTV
NYQEKTYAAG KIPGGFFKRE GRPSEDETLI ARLIDRPIRP LFPNGFKNEV QVIITVVSVD
PQIEPDIISM IGTSAALAIS GIPFSGPLGA ARVGYIDGEY VLNPSVAQLA TSQLNLVVAG
TAGAVLMVES EAQALPEEVM LGSVVYGHDQ QQVVIKAIAE FKAEAGKPTW DWTAPTQDAD
LVAQIKELAE AGLGDAYKIQ VKQDRYAQVS VVKAATKEAL LASNPSIDLR EVDNLLGSLE
KKVVRGRIIR GEPRIDGREP DMIRALSVLA GVLPRTHGSA LFTRGETQAL VTCTLGTERD
AQKIDSIMGE RTNRFMLHYN FPPYSVGETG MVGSPKRREI GHGKLAWRGI NAVMPSAAEF
PYSVRVVSEI TESNGSSSMA SVCGTSLALM DAGVPIKTSV AGIAMGLVKE GDDFVVLSDI
LGDEDHLGDM DFKVAGTRDG ITALQMDIKI EGITKEIMDI ALQQAYGARV HILNVMDQAI
GSHRDDISDH APRITVIKIN PEKIRDVIGK GGAVIRALTE ETGTTIELED DGTVKIASSN
GEATKEAIRR IEEITSEVEV GRIYNGKVIR IVDFGAFVNI LPGKDGLVHI SQISDERVAN
VSDHLELNQE VAVKVMEVDR QGRVRLSIKE AQTKEAAAAE
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