Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3232 |
Symbol | |
ID | 5373410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 3856608 |
End bp | 3857867 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640831482 |
Product | nucleoside transporter |
Protein accession | YP_001367422 |
Protein GI | 153001741 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1972] Nucleoside permease |
TIGRFAM ID | [TIGR00804] nucleoside transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000294256 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATAT TGATGAGTTT AGTAGGGGTG GTCACCCTAC TTGCGATAGG TTTCCTCCTA TCGAATAACA AAAAAGCAAT TAATTTACGT ACAGTGGGTG GCGCTTTAGC TATTCAGGCC GCTTTCGGTG GTTTTGTACT GTACGTTCCT GTTGGTAAAG ACATTCTGAA AGGTATGTCT GATGCAGTTT CTAGCGTTAT TGGTTACGCA CAAAACGGTA TCGGTTTCCT GTTCGGTGAT TTAGCTAACT TTAAACTTGG CTTCATCTTC GCAGTTAACG TGTTACCCGT TATTGTGTTC TTCTCTTCAT TGATTGCTGT GCTTTATTAC TTAGGCATCA TGCAGTGGGT TATCCGTATT ATCGGTGGCG CGCTACAAAA AGCATTAGGT ACAAGCCGTA CAGAATCAAT GTCAGCAACA GCTAACATCT TCGTGGGTCA AACTGAAGCT CCTCTGGTTG TTCGTCCATT CATTCCAACT ATGACGCAGT CTGAACTGTT TGCGATCATG GTGGGTGGTT TGGCGTCAAT CGCGGGTTCT GTTTTGGCTG GTTACGCGCA GATGGGTGTA CCTATCGAGT ACTTAGTTGC CGCATCATTC ATGGCAGCAC CAGGTGGTCT ATTAATGGCT AAACTGATGC ACCCTGAAAC TGAAGTTGCT AAGAACGACA TGAGCGATTT GCCAGAAGAT CCTGACAAAC CAGCTAACGT GTTAGATGCA GCTGCAGCAG GTGCTTCATC TGGTATGCAC TTAGCACTAA ACGTAGGTGC TATGCTGTTA GCCTTCGTTG GTTTGATCGC TATGATCAAC GGTATCATTG GTGGTATCGG TGGTTGGGTG GGCATGCCTC AGTTAACACT TGAGCTGATT CTTGGCTATG TGTTCATGCC GTTAGCATTC CTTATCGGTG TACCTTGGAA TGAAGCATTA GTAGCAGGTT CTTTCATCGG TCAAAAGATC GTAGTTAACG AATTTGTTGC TTACTTAAAC TTTGCTCCAT ACCTGAAAGA CATCGCTGAT GGCGGTATGG TAGTAGCTGA AACGGGTCTA GCAATGACTG ACAGAACCAA AGCGATTATC TCCTTTGCTC TGTGTGGTTT CGCTAACTTG TCTTCAATCG CGATTCTGCT TGGTGGTTTA GGTGCTATGG CTCCTACTCG TCGCCATGAC TTAGCTACAA TGGGTATTCG TGCGGTTATC GCCGGCTCTT TAGCTAACTT AATGAGTGCG ACACTTGCTG GTCTGTTCTT AGCTATGTAA
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Protein sequence | MNILMSLVGV VTLLAIGFLL SNNKKAINLR TVGGALAIQA AFGGFVLYVP VGKDILKGMS DAVSSVIGYA QNGIGFLFGD LANFKLGFIF AVNVLPVIVF FSSLIAVLYY LGIMQWVIRI IGGALQKALG TSRTESMSAT ANIFVGQTEA PLVVRPFIPT MTQSELFAIM VGGLASIAGS VLAGYAQMGV PIEYLVAASF MAAPGGLLMA KLMHPETEVA KNDMSDLPED PDKPANVLDA AAAGASSGMH LALNVGAMLL AFVGLIAMIN GIIGGIGGWV GMPQLTLELI LGYVFMPLAF LIGVPWNEAL VAGSFIGQKI VVNEFVAYLN FAPYLKDIAD GGMVVAETGL AMTDRTKAII SFALCGFANL SSIAILLGGL GAMAPTRRHD LATMGIRAVI AGSLANLMSA TLAGLFLAM
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