| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3231 |
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| Symbol | |
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| ID | 5373409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 3855398 |
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| End bp | 3856255 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640831481 |
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| Product | nucleoside-specific channel-forming protein Tsx |
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| Protein accession | YP_001367421 |
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| Protein GI | 153001740 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3248] Nucleoside-binding outer membrane protein |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000002039 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAACG TTAAAACTTT AGCTTTAGCC GCTACTGCTG TAGCTGCAAT CTCTGGCAAC
GCATTTGCCG CTGATCGTAC AGATCTTCAC GGTACTGATT ACAAGTGGAT GCAGTTCAAC
GCTATGTACT CTATCGGTGA AAAACCAGAG AGCCCAGCGG CTGGCGATCA ACATAACTAC
TTAGAAATGG AATTCGGCGG TCGTTCTGGC GTATTCGATC TATACGGTTA TGTTGACGTA
TTCAACTTGG CAAACGAAAC ATCAAGCAAT GGTGACAAGA ATCCAGGTAC AGGTAAAAGT
AAGCTGTTTA TGAAGTTTGC TCCACGTGTA TCTATCGATG CGCTTACTGG TAAAGACTTG
TCTTTTGGAC CAATTCAAGA AGTTTACTTC TCTACTCTGT TCAACTGGGA TGGTAATGTA
GGCGAAGGCG TTAACTCTAC TTTTTGGGGT GTTGGTGCTG ACGTAAACGT GCCTTGGTTA
GGCAAAACAG GCATGAACCT GTACGGTTAC TATGACATGA ACGCTAAAGA GTGGAATGGC
TACCAGTTCT CTGCTAACTG GTTCAAGCCT TTCTACTTCT TCGATAACAA GAGCTTCCTG
TCATTCCAAG GTTACATCGA TTATCAATTT GGTGCTGACG AAGCATATTG GCCTGTTGTT
GAGAATGGTC CTCTAGTTAA GGGTAAATCA ACAAACGGCG GTAACGTATT CTTCGGTCTA
TACTGGCATT CAGATCGTTA TGCTCTGGGT TATGGCTTGA AAGGCTTCAA AGATGTTTAC
TTACTAACTG ATGATGGTGC TACTGGCCTA GAATCAACAG GTTGGTCACA CTACCTGTCA
GCAACTTACA AGTTCTAA
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| Protein sequence | MKNVKTLALA ATAVAAISGN AFAADRTDLH GTDYKWMQFN AMYSIGEKPE SPAAGDQHNY
LEMEFGGRSG VFDLYGYVDV FNLANETSSN GDKNPGTGKS KLFMKFAPRV SIDALTGKDL
SFGPIQEVYF STLFNWDGNV GEGVNSTFWG VGADVNVPWL GKTGMNLYGY YDMNAKEWNG
YQFSANWFKP FYFFDNKSFL SFQGYIDYQF GADEAYWPVV ENGPLVKGKS TNGGNVFFGL
YWHSDRYALG YGLKGFKDVY LLTDDGATGL ESTGWSHYLS ATYKF
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