Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3228 |
Symbol | |
ID | 5370068 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 3851470 |
End bp | 3852684 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640831478 |
Product | phosphopentomutase |
Protein accession | YP_001367418 |
Protein GI | 153001737 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1015] Phosphopentomutase |
TIGRFAM ID | [TIGR01696] phosphopentomutase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGTA CCATTATTAT GATGTTGGAC TCCTTTGGAG TCGGTGCTTC TGCTGATGCA GCAAGCTTTG GTGATGTTGG TTCCGATACC TTTGGTCATA TTGCTAAAGC ATGTGCTGAA GGCAAAGCCG ATATTGGCCG TGAAGGCCCA CTTAAATTAC CTAACCTAGC GCGCTTAGGT TTAGGCCATG CGGCGATGGA AAGTACGGGC GCCTTTGCCC CAGGTTTTGG TGACAATGTT GAGCTGATTG GTGCTTATGG TCATGCCCAA GAGTTAAGTT CGGGTAAAGA TACCCCGAGC GGTCACTGGG AAATGGCGGG CGTGCCCGTA CTATTCGAAT GGGGCTACTT TAGTGAGCAC CAAAATTCTT TCCCTAAAGA ACTGACGGAT AAGATTTTAG CCCGTGCGGG TCTGGATGGA TTCTTAGGTA ATTGCCATGC CTCAGGTACA ACCATTTTAG AAGAGTTAGG CGAAGAGCAC ATGCGCTCAG GCAAGCCTAT TTTCTACACC TCTGCTGATT CAGTATTCCA AATTGCTTGT CATGAAGAAA CCTTCGGTTT AGACAATCTC TATCGTCTTT GCGAAATAAC CCGTGAAGAG TTAGAGCCTT ACAACATAGG TCGCGTCATT GCCCGTCCAT TTGATGGCAC GGGTCCGAGT GACTTTGCCC GTACCGGCAA TCGTAAGGAT TATTCACTAG AGCCACCGGC AAAAACCGTA TTAGACAAGC TGAAAGAAGC GGGCGGTGAA GTCGTGAGTG TGGGCAAGAT TGCAGATATT TATGCTTACT GCGGTATCAC TAAAAAAGTG AAGGCAAACG GTTTAGAAGC GCTTTTCGAT GCGACCTTAG CCGAAGTGAA ATCTGCGGGT GATAACACTA TAGTGTTTAC TAACTTCGTG GATTTTGACT CTCATTATGG TCATCGCCGT GATGTGGCAG GCTACGCTAA AGGGTTGGAA TATTTCGATG CCCGTTTGCC TGAAATGCTC GCATTATTGG GTGAAGACGA TCTGCTGATT TTAACGGCGG ATCACGGATG CGATCCAACA TGGCAAGGTA CGGATCATAC CCGTGAATAT GTGCCAGTAT TAGCCTTTGG CGCTGGATTG AAAGCTGGTT CTCTGGGTCG TCGTAAGAGC TTTGCCGATA TCGGTCAATC TATTGCGAGC CACTTTAAGC TTGAACCTAT GGCCTATGGT GAATCTTTCC TTTAG
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Protein sequence | MKRTIIMMLD SFGVGASADA ASFGDVGSDT FGHIAKACAE GKADIGREGP LKLPNLARLG LGHAAMESTG AFAPGFGDNV ELIGAYGHAQ ELSSGKDTPS GHWEMAGVPV LFEWGYFSEH QNSFPKELTD KILARAGLDG FLGNCHASGT TILEELGEEH MRSGKPIFYT SADSVFQIAC HEETFGLDNL YRLCEITREE LEPYNIGRVI ARPFDGTGPS DFARTGNRKD YSLEPPAKTV LDKLKEAGGE VVSVGKIADI YAYCGITKKV KANGLEALFD ATLAEVKSAG DNTIVFTNFV DFDSHYGHRR DVAGYAKGLE YFDARLPEML ALLGEDDLLI LTADHGCDPT WQGTDHTREY VPVLAFGAGL KAGSLGRRKS FADIGQSIAS HFKLEPMAYG ESFL
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