Gene Shew185_3188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3188 
Symbol 
ID5370083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3803940 
End bp3804920 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content43% 
IMG OID640831441 
Productputative CheW protein 
Protein accessionYP_001367381 
Protein GI153001700 
COG category[K] Transcription
[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAA TAAAAAAATC AGAAATATTG ACCGAAAGTG GCACAAATGA ACTCGAAATT 
ATTGAGTTTC ATCTGCATAA GATACTCCCT AATGGAGGCC ATAAAGTGTG TCATTACGGG
ATCAATGTCG CCAAAGTGAG GGAAGTGATT AGGGTGCCAG AAACCTCAGA TTATCCCAAT
GCTCAGCCGC ATATGGTGGG GGTGTTCTCG TTGCGAGAAA AGCTGATCCC TTTAGTCGAT
CTTGCAGGTT GGCTCGGGAT CTCTACACCG GAGGATTTAA CCCACAAAGT CGTTATCGTC
ACTGATTTTA ATAAGATGAT TAATGGTTTC TTAATAGATA GCGTTCGTAG CATTCATCGG
GTGTCGTGGG AGCAAGTTGA ATCACCGAGT CAATTTTTAG AAGCGGGTGA AAATGATTGT
GTCGTTGCTG TGGTTCGCCG TGATGGCATG CTGATTATGA TATTGGATTT TGAGAAGATT
ATTGCCGATA TCAATCCTGA ACTGAGTATG GATAAGTACG ATGTCACGCT CGATAGGAGT
GTGCTGATAA ATGACAAAAT GCTGGCAAAA CGTGAAGCGA AAACGATTTT AATCGTCGAT
GACTCAGCCT TCATTCGCAA AATGATTGAA AATACGCTCC GCAGCGCAGG TTACAACATT
ATTACCGCCA AAGATGGTGG TGATGCTCTT GAAATGCTAA TGGAATTTGA GAGTCTGGCT
GAACAAGATA ATGCCTCTAT TTCTGATTTT GTCAGTGCCG TGATCACGGA TGTTGAAATG
CCTCGCATGG ATGGGATGCA TCTGGTTAAA CGATTAAGAG AATCCAAGGC ATACCAACAA
ATGCCGATTG TGATGTTTTC TTCCCTAATG AGCGAGGATA ACCGCACAAA GGCGATGGCA
TTGGGGGCAA ATGACACTAT TACTAAACCC GAAATTGGCC GTATGGTCGG TATGATAGAT
AAATACGTAT TCGAAGAGTA A
 
Protein sequence
MSEIKKSEIL TESGTNELEI IEFHLHKILP NGGHKVCHYG INVAKVREVI RVPETSDYPN 
AQPHMVGVFS LREKLIPLVD LAGWLGISTP EDLTHKVVIV TDFNKMINGF LIDSVRSIHR
VSWEQVESPS QFLEAGENDC VVAVVRRDGM LIMILDFEKI IADINPELSM DKYDVTLDRS
VLINDKMLAK REAKTILIVD DSAFIRKMIE NTLRSAGYNI ITAKDGGDAL EMLMEFESLA
EQDNASISDF VSAVITDVEM PRMDGMHLVK RLRESKAYQQ MPIVMFSSLM SEDNRTKAMA
LGANDTITKP EIGRMVGMID KYVFEE