| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3170 |
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| Symbol | |
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| ID | 5371639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 3780125 |
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| End bp | 3783268 |
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| Gene Length | 3144 bp |
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| Protein Length | 1047 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640831423 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_001367363 |
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| Protein GI | 153001682 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.130532 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGGTTAT CCGATGTTTC GGTTAAACGC CCTGTCGTTG CCATCGTTTT AAGCTTACTG
CTGTGCGTAT TCGGCATAGT CTCCTTCTCT AAATTGTCGA TACGGGAAAT GCCCGACGTC
GAAAGCCCTG TGGTCACCAT TAGCACCAGT TACTCGGGTG CGTCGGCGGC CATTATGGAA
AGCCAGATCA CTAAAACCCT AGAAGATGAA CTGACGGGGA TCAGTGGTAT CGACGAAATC
ACGTCGACCA CCCGTAATGG TAGCTCGCGT ATCACTGTGA AATTCCTCCT CGGGTGGAAC
TTAACCGAAG GCGTAAGTGA TGTGCGTGAC GCTGTGGCCC GTGCCCAGCG CAGGCTGCCT
GAAGATGCGA AAGATCCTGT CGTCTCCAAA GACAACGGTT CGGGCGAGCC CTCCGTCTAT
GTGAATTTAA GTTCGAGTGT GATGGACCGC ACTCAATTAA CGGATTACGC CCAGCGCGTG
TTAGAGGACA GGTTTAGCCT TATCAGCGGC GTGAGCTCCA TCAGTATTTC TGGTGGTTTA
TACAAGGTCA TGTACGTCAA GCTCAGACCC GAGCAAATGG CGGGCCGCAA TGTCACAGTC
ACAGACATAA CGAACGCGCT GCGCAAAGAA AACATCGAAA CACCCGGCGG CCAAGTGCGA
AACGACACGA CTGTGATGTC GGTGCGTACC AAACGCTTGT ACTACACGCC AAAGGATTTT
GACTACCTTG TGGTGCGTAC CGCCAGCGAT GGCACGCCTA TCTACTTAAA AGATGTGGCC
GATGTGGCTG TTGGCGCACA AAACGAAAAC TCGACCTTCA AAAGCGACGG TATCGTTAAC
ATCAGCTTAG GCATTATTGC CCAGTCCGAT GCCAACCCAT TGCTCGTTGC CAAAGAAGTG
CACCAAGAAG TCGATCGCGT ACAAGACTTC CTGCCCGAAG GCACTAGCCT AGTGGTCGAC
TTCGACTCGA CCGTATTTAT CGACCGCTCG ATTAACGAGG TGTATAGCAC CCTTTATGTC
ACCGGCGCCC TAGTGGTACT CGTGCTGTAT ATCTTTATCG GACAAGCGCG GGCGACACTC
ATCCCTGCGG TAACGGTTCC GGTATCGTTA ATCTCGGCAT TTATCGCCGC TAACATGCTA
GGTTATTCGA TTAACCTACT GACATTGATG GCGTTAATCC TCTCAATCGG TCTAGTGGTC
GATGATGCGA TTGTGGTGGT CGAGAACATT TTCCACCATA TAGAAAAAGG CGAAGAGCCC
TTACTCGCCG CCTATAAAGG CACCCGCGAA GTCGGCTTTG CCGTTGTCGC CACCACGGCG
GTATTAGTTA TGGTATTCCT GCCGATTTCC TTTATGGAGG GTATGGTCGG ACTCTTATTT
ACCGAGTTCT CCGTGATGCT GGCGGTGTCG GTGCTGTTTT CCTCCTTAGT AGCACTGACA
CTTACGCCCG TGCTGAGCAG CAAGTTACTT AAAGCCAACG TCAAACCGAA TCGCTTTAAT
CGTTGGGTCG ATCGCGGTTT TGCCCGCATG GAAAGCGTCT ATCGCGTCGC CGTTACTCGG
GCGATTAAAC TTCGTCTACT CGCGCCCTTA GTTATTCTCG CCTGTATCGG CGGCAGTGCT
TGGTTAATGC AACAAGTGCC GTCACAGCTG GCGCCGCAGG AAGACCGCGG TGTGTTGTTC
GCCTTTGTTA AAGGCGCCGA AGGCACCAGT TATAACCGTA TGACAGCTAA CATGGATATC
GTCGAAGACA GACTTATGCC CTTGCTGGGT CAAGGTGTGC TGCGCTCCTT CAGCGTGCAA
GCCCCCGCGT TTGGTGGCCG TGCGGGCGAT CAAACGGGCT TTGTGATCAT GCAGCTTGAA
GATTGGGGCA CACGCACCGA ATCCGCACAG CAAGCGCTTG GGATTATTAG CAAAGCATTG
AAAGACATTC CCGATGTCAT GGTTCGCCCT ATGATGCCAG GCTTTAGGGG CCAATCGAGT
GAACCGGTGC AATTTGTGCT TGGTGGTTCG GACTATGCCG AACTGTTTAA GTGGGCGCAG
GTGCTCAAAG AAGAAGCCAA TGCCAGCCCT ATGATGGAAG GTGCCGATTT AGACTACGCC
GAAACCACGC CTGAGCTTAT TGTTACTGTT GATAAAGAAC GCGCGGCGGA GCTTGGGATC
AGTGTCGATG ACGTCTCGCA AACCTTAGAA GTGATGCTCG GCGGTCGCAC CGAAACCACC
TATGTGGATC GCGGCGAAGA GTACGATGTG TACTTGCGCG GTGATGAAAA CAGTTTTAAC
AACGTTGGCG ATCTTAGCCA AATCTACATG CGTTCCGGTA AAGGCGAATT AGTGACGCTT
GATACCGTGA CCCATATCGA AGAGATTGCT TCGGCACAAA GATTAAGTCA CACCAATAAG
CAAAAATCGA TCACCCTCAA GGCTAACGTC AGTGAAGGCT ACACCTTAGG TGAAGGCTTA
AAGTTTCTTG ATGCTAAAGC CATTGAATTA TTACCTAAAG ATATTTCCAT TGGTTACACC
GGCGAATCCA AAGACTTTAA GGAAAACCAA AGCAGTATCT TCATCGTATT TGGTTTGGCC
TTACTGGTCG CTTACTTAGT CTTAGCCGCG CAGTTTGAGA GTTTTATCAA CCCGTTAGTG
GTTATGTTTA CTGTGCCTAT GGGCGTATTT GGTGGTTTCT TAGGTCTATT GATCACCAGT
CAAGGGATCA ACATCTACAG CCAGATCGGC ATGATCATGT TGATTGGTAT GGTGACCAAA
AACGGTATCC TTATCGTTGA GTTTGCTAAC CAATTGCGTG ACCGCGGCTT TGAACTCGAT
AAAGCCATTA TCGACGCTTC ATCCCGTCGT TTGCGGCCAA TCCTAATGAC AGCATTCACC
ACTTTAGTTG GCGCTGTACC GTTAATTTTC TCGACGGGCG CAGGCTCAGA AAGTCGTATC
GCTGTGGGTA CTGTAGTGTT CTTCGGTATG GCATTCGCCA CCTTTGTGAC ACTACTCGTC
ATCCCTGCCA TGTATCGATT AATCTCGGCA GCGACCCATT CACCGGGATA TGTTGAAGCT
AAGCTTGAAG CGGCAATTAA AGCACAAGAG TTAGCGGCCC AAGAGGCGGC CGCAAAACAG
CAGGAACTCA CGCCTAAAGC CTAA
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| Protein sequence | MWLSDVSVKR PVVAIVLSLL LCVFGIVSFS KLSIREMPDV ESPVVTISTS YSGASAAIME
SQITKTLEDE LTGISGIDEI TSTTRNGSSR ITVKFLLGWN LTEGVSDVRD AVARAQRRLP
EDAKDPVVSK DNGSGEPSVY VNLSSSVMDR TQLTDYAQRV LEDRFSLISG VSSISISGGL
YKVMYVKLRP EQMAGRNVTV TDITNALRKE NIETPGGQVR NDTTVMSVRT KRLYYTPKDF
DYLVVRTASD GTPIYLKDVA DVAVGAQNEN STFKSDGIVN ISLGIIAQSD ANPLLVAKEV
HQEVDRVQDF LPEGTSLVVD FDSTVFIDRS INEVYSTLYV TGALVVLVLY IFIGQARATL
IPAVTVPVSL ISAFIAANML GYSINLLTLM ALILSIGLVV DDAIVVVENI FHHIEKGEEP
LLAAYKGTRE VGFAVVATTA VLVMVFLPIS FMEGMVGLLF TEFSVMLAVS VLFSSLVALT
LTPVLSSKLL KANVKPNRFN RWVDRGFARM ESVYRVAVTR AIKLRLLAPL VILACIGGSA
WLMQQVPSQL APQEDRGVLF AFVKGAEGTS YNRMTANMDI VEDRLMPLLG QGVLRSFSVQ
APAFGGRAGD QTGFVIMQLE DWGTRTESAQ QALGIISKAL KDIPDVMVRP MMPGFRGQSS
EPVQFVLGGS DYAELFKWAQ VLKEEANASP MMEGADLDYA ETTPELIVTV DKERAAELGI
SVDDVSQTLE VMLGGRTETT YVDRGEEYDV YLRGDENSFN NVGDLSQIYM RSGKGELVTL
DTVTHIEEIA SAQRLSHTNK QKSITLKANV SEGYTLGEGL KFLDAKAIEL LPKDISIGYT
GESKDFKENQ SSIFIVFGLA LLVAYLVLAA QFESFINPLV VMFTVPMGVF GGFLGLLITS
QGINIYSQIG MIMLIGMVTK NGILIVEFAN QLRDRGFELD KAIIDASSRR LRPILMTAFT
TLVGAVPLIF STGAGSESRI AVGTVVFFGM AFATFVTLLV IPAMYRLISA ATHSPGYVEA
KLEAAIKAQE LAAQEAAAKQ QELTPKA
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