| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3154 |
|---|
| Symbol | nusB |
|---|
| ID | 5373531 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 3764254 |
|---|
| End bp | 3764658 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640831408 |
|---|
| Product | transcription antitermination protein NusB |
|---|
| Protein accession | YP_001367348 |
|---|
| Protein GI | 153001667 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0781] Transcription termination factor |
|---|
| TIGRFAM ID | [TIGR01951] transcription antitermination factor NusB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000000167856 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCTT CTGAGCGCCG CAAGGCCCGC CGTTTAGCCG TTCAAGCCAT CTATTCATGG
CAACTAAGCG GGAATAATAT TGCCGATGTC GAGCATGAGT TTTTAACTGA ACAAAGTCTC
GACGGTGTTG ATGTAGCTTA TTTTCGTGAG CTATTTTCAG GCGTTGCAAC GAAGAAAACC
CAATTGGATG AGCTGATCAT CCCGCATCTG GAACGCCCGA TTGATGAAGT GTCTCCAGTA
GAGAAAGCCA TAGTTCGTTT AGCGACCTAT GAGCTGACTT TCCGTAAAGA TGTGCCATAC
AAGGTCGCGA TTAACGAAGC GATTGAGTTG GCAAAAGCTT TCGGTGCGGA CGAGAGTCAT
AAGTTTGTGA ACGGACTGCT CGACAAACTG GTTGCACGCA AGTAA
|
|---|
| Protein sequence | MKPSERRKAR RLAVQAIYSW QLSGNNIADV EHEFLTEQSL DGVDVAYFRE LFSGVATKKT
QLDELIIPHL ERPIDEVSPV EKAIVRLATY ELTFRKDVPY KVAINEAIEL AKAFGADESH
KFVNGLLDKL VARK
|
|---|
| |