Gene Shew185_3153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3153 
Symbol 
ID5371210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3763219 
End bp3764190 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content52% 
IMG OID640831407 
Productthiamine-monophosphate kinase 
Protein accessionYP_001367347 
Protein GI153001666 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0611] Thiamine monophosphate kinase 
TIGRFAM ID[TIGR01379] thiamine-monophosphate kinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000108532 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCAAACT GTACAGTGAA AGAATTCCAA TTAATTGAAT GTTATTTTAG CAACCGCGGC 
CCCACTCGCC GTGATGTGAA GCTTGGCATC GGTGACGATT GCGCTTTAGT GCAACCCGCA
GAAAACAAGT CGATTGCTAT CTCCTGTGAC ACCTTAGTCG AAAATGTCCA TTTCTTCCCC
GATATGCCTC CTGCTGCCTT AGGTTACAAA GCCTTAGCTG TAAATTTATC TGATCTGGCT
GCCATGGGCG CTGAGCCCGC GTGGATGACG CTTGCCTTGA CGCTACCCGA AGTCGATGAA
ACTTGGCTCA GTGGTTTTAG CGAAGGTTTA TTTGAAGCAG CCGATTACTA TGGCATCGCC
TTAATTGGCG GCGATACGAC TCGTGGCCCA CGGGCGATTA ACATCACAGT GCACGGCCAA
GTCCCACAGG GTAAGGCACT CACGCGTCAT GGTGCTAAAG CCGGTGATTG GATTTATGTC
ACGGGCACGC TCGGAGATTC GGCCTTAGGT CTGGATATCA TTCGCGGCGC CCAACAGGCT
AGAGCTGAGC ACAAAGAATT CCTGATTAAT CGCCATTATC GCCCAACACC AAGAGTCTTA
GCGGGCCAAG CTTTGCGTTC GCTAGCCTCC AGTGCTATCG ACCTTTCCGA CGGGTTTATC
TCGGATATCG GTCATGTGCT TAAGGCTTCG GCAGTTGGTG CGGTTGTCGA TGTCAATTGC
ATCCCGCTTT CGCGTGCGAT GCAAGATACC GTCAGCGAGG AGCATGCCTT AGGTTATGCA
CTGACAGGCG GCGAAGATTA CGAATTGCTG TTCACCGTTC CTGAGGCGCA AAAAGGCGCG
CTTGAGACAG CATTAAGCCA TGCAGGAGCA AAATTTGTTC GTGTTGGGCA AATTTGTGCG
GGCAGTAAGC TCAAGTTACA ACTCAATGGT GAGCCGTTTA CGCCGCCGTA TCACGGTTTC
GAGCACTTCT AA
 
Protein sequence
MPNCTVKEFQ LIECYFSNRG PTRRDVKLGI GDDCALVQPA ENKSIAISCD TLVENVHFFP 
DMPPAALGYK ALAVNLSDLA AMGAEPAWMT LALTLPEVDE TWLSGFSEGL FEAADYYGIA
LIGGDTTRGP RAINITVHGQ VPQGKALTRH GAKAGDWIYV TGTLGDSALG LDIIRGAQQA
RAEHKEFLIN RHYRPTPRVL AGQALRSLAS SAIDLSDGFI SDIGHVLKAS AVGAVVDVNC
IPLSRAMQDT VSEEHALGYA LTGGEDYELL FTVPEAQKGA LETALSHAGA KFVRVGQICA
GSKLKLQLNG EPFTPPYHGF EHF