| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3144 |
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| Symbol | |
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| ID | 5372120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 3750918 |
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| End bp | 3753125 |
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| Gene Length | 2208 bp |
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| Protein Length | 735 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640831398 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_001367338 |
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| Protein GI | 153001657 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000386215 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCTCTG TTCGCGAAGC GCACTTTAAT GATCCCGATT TTCACTTAGA AGATTGGGTG
GCTCGCTATG TCGGTCATGC CGATGAAGCG CAGATGCTGC TCTCCTTGAT AGGGCAGATT
GACGCTTTAC CCGCCAAGAG TCCTGCGGCG AAGAGAGAAC TGCTCGAACG TGCTCGAGAG
ATGATCGAAA TCCTCGCACC GCTGAACATG GACATTGAAA CCCTGCAAGC GGCGATTCTG
TTTGTGGTGT TCGATGCTGG GTTACTGACC GAAGAAGCCA TCAAGGAGAA ATTTGGTGAG
CCGCTGGCGC GTTTAGTGGC GAGTGTTGTG ACCATGAATG CCATCGGCGC CTTGAAAATC
AATCCCAACA GTCGCTCCAC CGAGCCGCAA ATCGACAACA TCCGCCGCAT GTTATTGGCG
ATGGTTGAAG ATGTGCGCGC TGTGGTCATC AAACTGGCTG AGCGTGTGTG TTTGCTGCGG
GCGGTGAAAA ATGCCGACGA AGAAACTCGC GTGCTACTGG CCCGCGAAAT TGCCGATATT
TATGCGCCGC TGGCCAACCG TTTAGGGATT GGACAATTGA AGTGGGAGCT GGAAGATATT
TCTTTTCGCT ACCTGCATCC AGATACCTAT AAAGACATTG CTAAGCAATT AGATGGCAAA
CGACTGGATC GTGAAGTCTT TATCGACAAG TTTGTCAGCC AGTTACAACA AAGATTAGAT
GAAGACCAAA TTCGCGCTAA GGTCTACGGC CGGCCGAAAC ATATCTACAG TATCTGGCGT
AAGATGAAGG GCAAACACCT CAAATTTGAT GAGTTGTTTG ACGTGCGCGC CGTGCGTATC
GTGACCGATC GTCTGCAGGA TTGTTATGGC GCATTAGGCG TAGTGCATAC GCTTTGGCAC
CATATTCCGC GGGAATTTGA CGATTATGTC GCCAACCCTA AACCTAACGG TTATCAATCG
ATTCATACCG TAGTGGTGGG GCCTGAGGGC AAAACCGTTG AAATTCAAAT CCGTACCCAA
GACATGCATG AAGATGCAGA ACTCGGTGTA GCCGCGCACT GGAAATACAA AGAAGGCAAT
CATTCCGGTA AGCAAAGCGG CTACGAAGAA AAAATTAACT GGCTGCGTAA AATTCTGCAA
TGGCAGGAAG ACGTGGTCGA AAGTGGCAAC TTGGTCGAAG AAGTGCGCAG CCAAGTGTTT
GAAGACAGAG TCTATGTGTT CACCCCAAGC GGTGAAGTCG TCGACTTGCC ACTGGGCTCA
ACCGTGCTCG ACTTTGCCTA TTACATTCAC TCCCAAGTGG GACATAAATG TATTGGTGCT
AAGGTCGATG GCCGTATTGT GCCGTTCACC TATCAGGTTG AAACGGGCGA GCGTATCGAG
ATCATCACCT CGAAACAGCC CAACCCCAAG CGCGACTGGC TTAACCCTAA CTTAGGTTAT
ATCCGTACCT CGCGGGCGCG TTCGAAAATC CAGCATTGGT TCAAGCAGCA GGACAGAGAC
AAGAATATTG TCGCCGGCAA AGAAATGCTT GAATCCGAAT TGGCGCGGGT GAGCCTTAAA
ATTAAAGACG CCGCCATCGC GGTCGAGCGC TTTAATATGG CGAGCATGGA TGACTTACTG
GCGGCGATTG GCGGCGGTGA TGTGCGTCTG CATCAAGTGG TTAACCATAT TCAAAGCCGT
CTGCGACTCG ACGAAGTGTC AGAAGAAGAT GCCGTCGAAG AATTAGTTAA GAAAGGCCAA
CATAAGCCGA CTTCCAGTGG CCGTGGTCAG GTTGAAGTCA ACGGTGTGGG TAACTTGCTT
AACCATATCG CCCGTTGTTG CCAGCCCGTT CCCGGTGATG AGATCTTAGG TTTTATCACG
AAAGGCCGTG GCATTTCTGT GCATCGCGCT GATTGTGAAC AAGTTAAAGA GTTAATGCGG
GTTCACCCAG AGCGTGGTGT CGATGTGGTC TGGGGTGAAA ATTACTCCGG CGGTTATCGT
ATGCGTTTGC GGGTATTAGC CCACGATCGC AGTGGCTTAT TGCGTGACTT AACCTCAGTG
TTGGCTGCTG AAAAATCCAA TGTATTAGCT ATGAGCTCGT CATCGGATAC CAAAAACCAG
ACCGCCGCGA TTGAGTTGGA ACTAGAGCTT TATAACCTTG ATGGTTTATC GCGAGTGTTA
TCTAAACTGA CCCAGGTCGA TAGCGTGATA GAAGCAAGAC GGCTTTAA
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| Protein sequence | MVSVREAHFN DPDFHLEDWV ARYVGHADEA QMLLSLIGQI DALPAKSPAA KRELLERARE
MIEILAPLNM DIETLQAAIL FVVFDAGLLT EEAIKEKFGE PLARLVASVV TMNAIGALKI
NPNSRSTEPQ IDNIRRMLLA MVEDVRAVVI KLAERVCLLR AVKNADEETR VLLAREIADI
YAPLANRLGI GQLKWELEDI SFRYLHPDTY KDIAKQLDGK RLDREVFIDK FVSQLQQRLD
EDQIRAKVYG RPKHIYSIWR KMKGKHLKFD ELFDVRAVRI VTDRLQDCYG ALGVVHTLWH
HIPREFDDYV ANPKPNGYQS IHTVVVGPEG KTVEIQIRTQ DMHEDAELGV AAHWKYKEGN
HSGKQSGYEE KINWLRKILQ WQEDVVESGN LVEEVRSQVF EDRVYVFTPS GEVVDLPLGS
TVLDFAYYIH SQVGHKCIGA KVDGRIVPFT YQVETGERIE IITSKQPNPK RDWLNPNLGY
IRTSRARSKI QHWFKQQDRD KNIVAGKEML ESELARVSLK IKDAAIAVER FNMASMDDLL
AAIGGGDVRL HQVVNHIQSR LRLDEVSEED AVEELVKKGQ HKPTSSGRGQ VEVNGVGNLL
NHIARCCQPV PGDEILGFIT KGRGISVHRA DCEQVKELMR VHPERGVDVV WGENYSGGYR
MRLRVLAHDR SGLLRDLTSV LAAEKSNVLA MSSSSDTKNQ TAAIELELEL YNLDGLSRVL
SKLTQVDSVI EARRL
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