| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3134 |
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| Symbol | ispD |
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| ID | 5371019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 3737169 |
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| End bp | 3737960 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640831388 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_001367328 |
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| Protein GI | 153001647 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.251899 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCAGAGC TAGGACATTT AGATCTTGGA TTAAGCGAAC AATCCAATCC AGGCAGTCAA
TCTGAGCCGG TAATGCAAAC TGAATTGCAG CGCCAAGCTG AGCATATCAC TCAAGCTGTG
GTGGCTATCG TTCCCGCTGC GGGCATTGGT AGCCGCATGG GCGCCGACAG ACCTAAACAA
TATCTTGAAG TGTGCGGCCA GAGTATTCTC GGCCATACTT TAGATAAGCT GTTGTCTCAC
CCGCACATTT CCCACGTCAT CGTCGCCTTA CATCCGAATG ATACTATTTT CAATACCCTG
CCACAGGCCG CGCATCCTAA ATTGACCACA GTATTAGGTG GCGGTGAGCG CGCTGATTCT
GTGTTGGCGG CGCTGCAAAT TGCGCCCGAG CACAGTTGGG CATTAGTGCA TGATGCGGCA
AGACCTTGTT TAACCGCGAC GGATATCGAC AAGTTACTCG CATCCAGAGT GCAATTTCCC
CAAGGCGCGA TTTTGGCCAT GCCAGTGCGC GATACCATGA AGCGCGCCAA TAAACTGGGC
GAAATCAGCG CTACTGTGTG CCGCGATAAT TTATGGCATG CATTAACGCC GCAGTTATTT
CAGGCAGCGC AACTAAAAGA TTACCTCAAT GCCGCTCTGG CGGCAGGTGC GGTAGTGACA
GATGAGGCTT CGGCGATGGA ATGGGCGGGC ATTTCACCTG GACTCGTTTC GGGCCGTGCT
GACAATATAA AAGTGACGCA TCCCGATGAT TTGGGATTGG CCGAATTGTT TTTAATGCGT
GCCGCAAAAT AA
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| Protein sequence | MSELGHLDLG LSEQSNPGSQ SEPVMQTELQ RQAEHITQAV VAIVPAAGIG SRMGADRPKQ
YLEVCGQSIL GHTLDKLLSH PHISHVIVAL HPNDTIFNTL PQAAHPKLTT VLGGGERADS
VLAALQIAPE HSWALVHDAA RPCLTATDID KLLASRVQFP QGAILAMPVR DTMKRANKLG
EISATVCRDN LWHALTPQLF QAAQLKDYLN AALAAGAVVT DEASAMEWAG ISPGLVSGRA
DNIKVTHPDD LGLAELFLMR AAK
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