| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3124 |
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| Symbol | alaS |
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| ID | 5371192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 3724375 |
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| End bp | 3726999 |
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| Gene Length | 2625 bp |
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| Protein Length | 874 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640831378 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_001367318 |
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| Protein GI | 153001637 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.600607 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATCAAA CTACAGCAGA GCTTAGAAGC GCTTTCCTCG AATTTTTCCG CAGCAATGGT
CATCAAGTTG TGGACAGTAG TTCATTAGTG CCAGGCAACG ATCCCACACT TTTATTTACC
AATGCAGGCA TGAACCAGTT CAAGGACGTG TTTCTTGGCA TGGACAAACG CAATTATACG
CGTGCGACCA CTGCTCAACG TTGTGTACGC GCCGGTGGTA AGCATAACGA TTTAGATAAC
GTCGGTTATA CAGCACGTCA TCACACCTTT TTCGAAATGC TAGGTAACTT CAGTTTTGGT
GATTATTTCA AGGAAGAAGC GATTCGTTTT GGCTGGACAT TCTTAACTGA AACGTTAAAG
CTGCCGAAAG AACGTCTGTG CGTCACTATT TATCAAACAG ACGATGAAGC CTTTGAAATT
TGGAATAAAA AGATTGGTGT TGCCGCCGAG AATATTATCC GTATCGGCGA TAATAAAGGT
GCAGCTTATG CGTCAGATAA CTTCTGGCAA ATGGGTGATA CTGGTCCTTG TGGCCCTTGT
ACTGAAATTT TCTATGACCA TGGCGATCAC ATTTGGGGTG GCCGTCCTGG CAGTCCTGAA
GAAGATGGCG ACCGTTTCAT CGAAATCTGG AACATCGTTT TCATGCAGTA CAACCGTCAA
GCATCAGGTG AAATGCTGCC TTTGCCTAAG CCATCGGTAG ATACTGGCAT GGGGATTGAG
CGTATCGCCG CGATTATGCA AGGCGTACAT TCTAACTACG AAATCGATAT ATTCCGTACT
TTGATCGCTA AAGCGGCAGA AATCATCGGC GTAAGCGATT TAACCGAGAA GTCACTGCGC
GTCATTGCCG ACCATATCCG TTCATGTGCA TTCCTTATTG CCGATGGCGT TATGCCGTCG
AACGAAGGCC GCGGTTATGT GCTGCGCCGC ATTATCCGCC GCGCAGTTCG CCATGGTAAC
AAGTTGGGCG CGACCGAAGC TTTCTTCTAT AAGTTGGTTC CATCTTTGAT TGCGGTGATG
GGCGATGCGG CTAAAGGGTT AGCTGAGACG CAAGTCATTG TTGAAAAAGC GCTGAAAGCG
GAAGAGGAGC AATTTGCCCG TACGCTTGAA CGTGGTTTAG GTATTTTAGA TACGGCCTTA
AACGAGCTGA AAGGTGACAC CTTAGACGGC GAAACCGTAT TTAAGCTGTA TGACACCTAT
GGCTTCCCAA TGGATTTGAC CGCTGACGTC TGCCGTGAGC GCAACATCAT TGTCGATGAA
GCAGGTTTCG AAGTCGCCAT GGCTGAGCAA CGTAGCCGCG CCCAAGCTGC TGGTAACTTT
GGTGCAGATT ACAACGCAGC GCTGAAAATC GATGCTGAAA CCGCATTCAC TGGTTACACC
GAATTAGCGG GCCAAGCTAA GGTCACCGCG ATTTATCTAA ACGGTGAGTC AGTGACGGCT
ATCAAGGCGG GTGACGAAGC GGTTGTCGTA CTCGATGTCA CACCTTTCTA CGCTGAATCT
GGCGGTCAAG TAGGCGATAA AGGCCAACTG GTTGCGAACG GTATTGAGTT TACGGTAAAC
GATACGCAAA AGTATGGTCA AGCAACGGGC CATCAAGGTG TTTTGGCTAC AGGTAGCTTG
AGCGTTGGCC AAGTTATTGA AGCGAAAGTG GACAAAAAAC TGCGTCACCG TACTCAGTTA
AACCATTCTG TTACACATTT ACTGCATGCT GCACTGCGTC AAGTGCTCGG TACTCACGTT
TCGCAAAAAG GTTCATTGGT TGATCCTGAG CGTTTACGTT TTGACTTCTC CCATTTCGAA
GGCGTAAAAG CCGCTGAATT AAAAGAAGTT GAAGAATTAG TTAATACTCA AATTCGTCGT
AACCATGAGC TGAAAACCGC TGAAATGGGT ATAGATGAAG CCAAAGAGAA AGGCGCTATG
GCACTCTTTG GTGAGAAATA TGACTCACAA GTGCGTGTTG TGACTATGGG TGATTTCTCT
ATCGAATTGT GTGGTGGTAC CCATGTGGGC CGCACGGGCG ATATTGGCTT GTTCAAAATC
ACCTCTGAAG CGGGTATTGC TGCGGGTGTA CGTCGTATCG AAGCCGTTAC TGGCGCTGCG
GCTATGGCCT ATGTGGCGCA GCAACAAGCT GAACTGGAAG AAGCTGCAGC CTTATTGAAA
GGCGATGCCA ACTCAGTTGT CGCTAAGTTA AAAGCCCAGC TCGACAAAAT GAAGCAACTC
GAAAAAGAAA TGGCGCAGTT GAAAGACAAG CTAGCGGCAG CAGCGAGTGC TGATTTAGTG
GGCGATGCCG TTGTGGTTAA TGGCGTTAAC GTGCTGATCA AAAAGTTAGA CGGCGTTGAG
GCAAGTTCAT TACGCGGTTT GCAAGATGAA TTAAAACAAA AATTGAAATC GGCCATTATC
GTTCTTGGCA CTACGCAGGA AGGGAAAGTT AACCTGATCG CCGGTGTGAG TAACGATCTG
ATCGGCAAAG TCAAAGCGGG TGAGCTAGTC GCTATGGTCG CTGCACAAGT GGGCGGTAAA
GGCGGCGGTC GTCCTGATAT GGCTCAAGCG GGCGGTAGCC AGCCAGAAAA TCTGGATGCG
GCATTGGCTC AAGTATTACC TTGGATTACT GAGCGTCTAG CTTAA
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| Protein sequence | MYQTTAELRS AFLEFFRSNG HQVVDSSSLV PGNDPTLLFT NAGMNQFKDV FLGMDKRNYT
RATTAQRCVR AGGKHNDLDN VGYTARHHTF FEMLGNFSFG DYFKEEAIRF GWTFLTETLK
LPKERLCVTI YQTDDEAFEI WNKKIGVAAE NIIRIGDNKG AAYASDNFWQ MGDTGPCGPC
TEIFYDHGDH IWGGRPGSPE EDGDRFIEIW NIVFMQYNRQ ASGEMLPLPK PSVDTGMGIE
RIAAIMQGVH SNYEIDIFRT LIAKAAEIIG VSDLTEKSLR VIADHIRSCA FLIADGVMPS
NEGRGYVLRR IIRRAVRHGN KLGATEAFFY KLVPSLIAVM GDAAKGLAET QVIVEKALKA
EEEQFARTLE RGLGILDTAL NELKGDTLDG ETVFKLYDTY GFPMDLTADV CRERNIIVDE
AGFEVAMAEQ RSRAQAAGNF GADYNAALKI DAETAFTGYT ELAGQAKVTA IYLNGESVTA
IKAGDEAVVV LDVTPFYAES GGQVGDKGQL VANGIEFTVN DTQKYGQATG HQGVLATGSL
SVGQVIEAKV DKKLRHRTQL NHSVTHLLHA ALRQVLGTHV SQKGSLVDPE RLRFDFSHFE
GVKAAELKEV EELVNTQIRR NHELKTAEMG IDEAKEKGAM ALFGEKYDSQ VRVVTMGDFS
IELCGGTHVG RTGDIGLFKI TSEAGIAAGV RRIEAVTGAA AMAYVAQQQA ELEEAAALLK
GDANSVVAKL KAQLDKMKQL EKEMAQLKDK LAAAASADLV GDAVVVNGVN VLIKKLDGVE
ASSLRGLQDE LKQKLKSAII VLGTTQEGKV NLIAGVSNDL IGKVKAGELV AMVAAQVGGK
GGGRPDMAQA GGSQPENLDA ALAQVLPWIT ERLA
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